Pre_GI: BLASTP Hits

Some Help

Query: NC_008148:672608:681145 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 681145, End: 682233, Length: 1089

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015565:624298:6307266307266317811056Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase6e-37154
NC_014377:149288:1507871507871518421056Thermosediminibacter oceani DSM 16646 chromosome, complete genomenicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase8e-35147
NC_015957:3067919:3067919306791930721364218Streptomyces violaceusniger Tu 4113 chromosome, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-34147
NC_015519:1113095:1129924112992411309791056Tepidanaerobacter sp. Re1 chromosome, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-30133
NC_016641:3173250:3183221318322131842911071Paenibacillus terrae HPL-003 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase7e-29128
NC_014622:1514416:1523862152386215249321071Paenibacillus polymyxa SC2 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-28127
NC_013385:1669510:1675537167553716766131077Ammonifex degensii KC4, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase3e-28125
NC_014483:1376500:1386104138610413871741071Paenibacillus polymyxa E681 chromosome, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase5e-28125
NC_016516:463460:4676744676744693411668Propionibacterium acnes TypeIA2 P.acn33 chromosome, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase5e-27122
NC_006085:481231:4854394854394871061668Propionibacterium acnes KPA171202, complete genomephosphoribosyltransferase, cobalamin biosynthesis enzyme, fusion CobTU5e-27122
NC_014039:499233:5034415034415051081668Propionibacterium acnes SK137 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase5e-27122
NC_019673:1656680:1661735166173516627721038Saccharothrix espanaensis DSM 44229 complete genomeNicotinate-nucleotide- dimethylbenzimidazolephosphoribosyltransferase2e-26120
NC_012491:1263469:1282874128287412839141041Brevibacillus brevis NBRC 100599, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-26119
NC_016511:472666:4768744768744785441671Propionibacterium acnes TypeIA2 P.acn31 chromosome, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-26119
NC_021171:415771:4312054312054322481044Bacillus sp. 1NLA3E, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase4e-24112
NC_011296:1151346:1153584115358411546271044Thermodesulfovibrio yellowstonii DSM 11347, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase)1e-23110
NC_014221:398636:4208564208564219081053Truepera radiovictrix DSM 17093 chromosome, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase2e-22107
NC_016148:141011:1577331577331587821050Thermovirga lienii DSM 17291 chromosome, complete genomenicotinate- nucleotide/dimethylbenzimidazolephosphoribosyltransferase3e-22106
NC_009718:1470972:1475886147588614769321047Fervidobacterium nodosum Rt17-B1, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-22106
NC_012969:142000:1600261600261610691044Methylovorus glucosetrophus SIP3-4 chromosome, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase6e-22105
NC_016802:1615748:1632702163270216337721071Corynebacterium diphtheriae HC02 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase4e-21102
NC_007951:1042291:1062971106297110640321062Burkholderia xenovorans LB400 chromosome 1, complete sequenceNicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase1e-1997.4
NC_007481:3167434:3187459318745931885201062Pseudoalteromonas haloplanktis TAC125 chromosome I, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-1997.4
NC_010506:4951500:4955400495540049564401041Shewanella woodyi ATCC 51908, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-1996.7
NC_015687:1508664:1517412151741215184701059Clostridium acetobutylicum DSM 1731 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-1893.6
NC_003030:1510000:1515811151581115168691059Clostridium acetobutylicum ATCC 824, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-1893.6
NC_017295:1507956:1515225151522515162831059Clostridium acetobutylicum EA 2018 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-1893.6
NC_011894:3885490:3886516388651638875471032Methylobacterium nodulans ORS 2060, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase3e-1892.8
NC_009831:4539952:4541429454142945424571029Shewanella sediminis HAW-EB3, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase5e-1892.4
NC_014328:3482980:3493284349328434943601077Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase6e-1892
NC_004369:2203947:2221692222169222227981107Corynebacterium efficiens YS-314, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-1791.3
NC_020291:1593143:1602208160220816033021095Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT2e-1790.1
NC_014484:762710:7832327832327843381107Spirochaeta thermophila DSM 6192 chromosome, complete genomenicotinate-nucleotide-- dimethylbenzimidazolephosphoribosyltransferase2e-1687
NC_011060:1334836:1353642135364213547061065Pelodictyon phaeoclathratiforme BU-1, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase3e-1686.3
NC_013517:1055854:1110499111049911115301032Sebaldella termitidis ATCC 33386, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase4e-1685.9
NC_011989:1638261:1659670165967016606921023Agrobacterium vitis S4 chromosome 1, complete sequencenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-1583.6
NC_016822:2201388:2241504224150422425831080Shigella sonnei 53G, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1582.8
NC_013353:2455052:2458475245847524595541080Escherichia coli O103:H2 str. 12009, complete genomenicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase9e-1581.6
AP010958:2455052:2458475245847524595541080Escherichia coli O103:H2 str. 12009 DNA, complete genomenicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase9e-1581.6
NC_007946:2155454:2169441216944121705201080Escherichia coli UTI89, complete genomeCobT, subunit of dimethylbenzimidazole phosphoribosyltransferase1e-1481.3
NC_004431:2304280:2318276231827623193551080Escherichia coli CFT073, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-1481.3
CP002797:2062006:2064378206437820654571080Escherichia coli NA114, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-1481.3
NC_008253:2056734:2070753207075320718321080Escherichia coli 536, complete genomenicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase1e-1481.3
NC_011149:2040396:2055144205514420562141071Salmonella enterica subsp. enterica serovar Agona str. SL483,nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-1480.5
NC_010468:1816359:1817656181765618187351080Escherichia coli ATCC 8739, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1479.7
NC_009800:2083465:2101990210199021030691080Escherichia coli HS, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1479.7
NC_009617:1487110:1495644149564414967351092Clostridium beijerinckii NCIMB 8052 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1479.7
NC_000913:2042935:2061412206141220624911080Escherichia coli K12, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1479.7
NC_010473:2119480:2152420215242021534991080Escherichia coli str. K-12 substr. DH10B, complete genomenicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase3e-1479.7
AC_000091:2027648:2065525206552520666041080Escherichia coli W3110 DNA, complete genomenicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase3e-1479.7
NC_011745:2209288:2270429227042922715081080Escherichia coli ED1a chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1479.7
NC_012759:1920955:1953895195389519549741080Escherichia coli BW2952 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1479.7
NC_012947:1769438:1770193177019317712721080Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1479.7
NC_012967:1967675:2001388200138820024671080Escherichia coli B str. REL606 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-1479.7
NC_009648:3476000:3497239349723934982941056Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase4e-1479.3
NC_015497:3794000:3813300381330038144931194Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase5e-1479
NC_011094:2061000:2076832207683220779021071Salmonella enterica subsp. enterica serovar Schwarzengrund strnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-1378.2
NC_004631:948054:9488249488249498941071Salmonella enterica subsp. enterica serovar Typhi Ty2, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-1377.8
NC_016832:948029:9487789487789498481071Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-1377.8
NC_011601:2139188:2178423217842321795021080Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-1377
NC_018012:1789028:1809405180940518104601056Thiocystis violascens DSM 198 chromosome, complete genomenicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase2e-1377
NC_008321:977500:9972599972599983111053Shewanella sp. MR-4, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase5e-1272.4
NC_016776:2913966:2918112291811229191491038Bacteroides fragilis 638R, complete genomeputative phosphoribosyltransferase1e-1067.8
NC_003228:2929006:2933152293315229341891038Bacteroides fragilis NCTC 9343, complete genomeputative phosphoribosyltransferase1e-1067.8
NC_012962:1827000:1845113184511318461621050Photorhabdus asymbiotica, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-1066.6
NC_014632:567289:5800125800125810641053Ilyobacter polytropus DSM 2926 chromosome, complete genomenicotinate- nucleotide/dimethylbenzimidazolephosphoribosyltransferase1e-0964.7
NC_011663:1159070:1180990118099011820721083Shewanella baltica OS223 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase6e-0962.4
NC_011758:326366:3424093424093434371029Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase2e-0653.9