Pre_GI: BLASTP Hits

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Query: NC_008148:3024867:3029834 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 3029834, End: 3031024, Length: 1191

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012527:288207:3046123046123057601149Deinococcus deserti VCD115 plasmid 1, complete sequencediaminopropionate ammonia-lyase3e-102372
NC_009142:5425763:5443600544360054447571158Saccharopolyspora erythraea NRRL 2338, complete genomepyridoxal-5'-phosphate-dependent enzyme, beta subunit5e-101368
NC_008578:1827605:1837635183763518388431209Acidothermus cellulolyticus 11B, complete genomePyridoxal-5'-phosphate-dependent enzyme, beta subunit1e-96353
NC_011894:5751417:5773052577305257742451194Methylobacterium nodulans ORS 2060, complete genomediaminopropionate ammonia-lyase5e-60231
NC_016642:1234500:1234792123479212360391248Pseudovibrio sp. FO-BEG1 chromosome, complete genomeDiaminopropionate ammonia-lyase3e-55216
NC_021182:401129:4124084124084136341227Clostridium pasteurianum BC1, complete genomediaminopropionate ammonia-lyase2e-55216
NC_011294:1006630:1009010100901010102241215Salmonella enterica subsp. enterica serovar Enteritidis strdiaminopropionate ammonia-lyase4e-54212
NC_020272:3396800:3422476342247634236721197Bacillus amyloliquefaciens IT-45, complete genomediaminopropionate ammonia-lyase1e-53210
NC_012225:47800:7087570875720681194Brachyspira hyodysenteriae WA1, complete genomediaminopropionate ammonia-lyase3e-53209
NC_010723:575254:5884415884415896491209Clostridium botulinum E3 str. Alaska E43, complete genomediaminopropionate ammonia-lyase5e-53208
NC_017243:2190000:2221022222102222222151194Brachyspira intermedia PWS/A chromosome, complete genomediaminopropionate ammonia-lyase5e-53208
NC_002695:3702344:3745841374584137470371197Escherichia coli O157:H7 str. Sakai, complete genomediaminopropionate ammonia-lyase3e-52206
NC_000913:2975659:3005532300553230067281197Escherichia coli K12, complete genomediaminopropionate ammonia-lyase3e-52206
NC_011751:3285646:3330070333007033312661197Escherichia coli UMN026 chromosome, complete genomediaminopropionate ammonia-lyase3e-52206
AC_000091:2976293:3006166300616630073621197Escherichia coli W3110 DNA, complete genome2,3-diaminopropionate ammonia-lyase3e-52206
CP002185:3167738:3204559320455932057551197Escherichia coli W, complete genome2,3-diaminopropionate ammonia-lyase3e-52206
CU928160:3030324:3065766306576630669621197Escherichia coli IAI1 chromosome, complete genome2,3-diaminopropionate ammonia-lyase3e-52206
NC_010473:3069529:3099402309940231005981197Escherichia coli str. K-12 substr. DH10B, complete genome2,3-diaminopropionate ammonia-lyase3e-52206
CU928145:3196173:3231651323165132328471197Escherichia coli 55989 chromosome, complete genome2,3-diaminopropionate ammonia-lyase3e-52206
NC_011750:3407500:3434796343479634359921197Escherichia coli IAI39 chromosome, complete genomediaminopropionate ammonia-lyase3e-52206
NC_011748:3196173:3231651323165132328471197Escherichia coli 55989, complete genomediaminopropionate ammonia-lyase3e-52206
NC_011353:3805819:3850238385023838514341197Escherichia coli O157:H7 str. EC4115 chromosome, complete genomediaminopropionate ammonia-lyase3e-52206
NC_014150:2994000:3007634300763430088271194Brachyspira murdochii DSM 12563 chromosome, complete genomediaminopropionate ammonia-lyase2e-52206
NC_002655:3769643:3813147381314738143431197Escherichia coli O157:H7 EDL933, complete genomediaminopropionate ammonia-lyase2e-52206
NC_013941:3540420:3569845356984535710411197Escherichia coli O55:H7 str. CB9615 chromosome, complete genomediaminopropionate ammonia-lyase3e-52206
NC_013364:3552284:3587735358773535889311197Escherichia coli O111:H- str. 11128, complete genome2,3-diaminopropionate ammonia-lyase3e-52206
NC_013008:3761467:3804964380496438061601197Escherichia coli O157:H7 str. TW14359 chromosome, complete genomediaminopropionate ammonia-lyase3e-52206
NC_012759:2862807:2892680289268028938761197Escherichia coli BW2952 chromosome, complete genomediaminopropionate ammonia-lyase3e-52206
NC_011741:3030324:3065766306576630669621197Escherichia coli IAI1 chromosome, complete genomediaminopropionate ammonia-lyase3e-52206
NC_011415:3217796:3253236325323632544321197Escherichia coli SE11 chromosome, complete genomediaminopropionate ammonia-lyase3e-52206
NC_019978:1022209:1027061102706110282901230Halobacteroides halobius DSM 5150, complete genomediaminopropionate ammonia-lyase9e-52204
NC_007384:3151344:3177205317720531784011197Shigella sonnei Ss046, complete genomeputative dehydratase1e-51204
NC_010674:615963:6243366243366255441209Clostridium botulinum B str. Eklund 17B, complete genomediaminopropionate ammonia-lyase2e-51203
NC_019908:2401577:2417563241756324187561194Brachyspira pilosicoli P43/6/78 chromosome, complete genomediaminopropionate ammonia-lyase5e-51202
NC_018604:2253539:2265135226513522663281194Brachyspira pilosicoli WesB complete genomediaminopropionate ammonia-lyase DpaL4e-51202
NC_014330:768232:8023458023458035381194Brachyspira pilosicoli 95/1000 chromosome, complete genomediaminopropionate ammonia-lyase DpaL4e-51202
NC_013315:2232339:2246673224667322478871215Clostridium difficile CD196 chromosome, complete genomediaminopropionate ammonia-lyase2e-50200
NC_013316:2309694:2327227232722723284411215Clostridium difficile R20291, complete genomediaminopropionate ammonia-lyase2e-50200
NC_017179:3540739:3556679355667935578931215Clostridium difficile BI1, complete genomediaminopropionate ammonia-lyase2e-50199
NC_013315:3532721:3548661354866135498751215Clostridium difficile CD196 chromosome, complete genomediaminopropionate ammonia-lyase2e-50199
NC_007205:1232734:1251973125197312531151143Candidatus Pelagibacter ubique HTCC1062, complete genomediaminopropionate ammonia-lyase7e-44178
NC_016614:1152500:1153722115372211549091188Vibrio sp. EJY3 chromosome 2, complete sequencediaminopropionate ammonia-lyase7e-42171
NC_010557:679656:7209977209977222231227Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceDiaminopropionate ammonia-lyase2e-37157
NC_018643:857911:8787698787698799201152Alpha proteobacterium HIMB5 chromosome, complete genomePyridoxal-phosphate dependent enzyme4e-37155
NC_008392:1029134:1052569105256910537951227Burkholderia cepacia AMMD chromosome 3, complete sequenceDiaminopropionate ammonia-lyase4e-37155
NC_007948:1972290:197429419742941974911618Polaromonas sp. JS666, complete genome2e-1584
NC_009633:3457185:3470176347017634714201245Alkaliphilus metalliredigens QYMF chromosome, complete genomethreonine dehydratase1e-1274.7
NC_006177:3457637:3457637345763734588691233Symbiobacterium thermophilum IAM 14863, complete genomethreonine dehydratase2e-1274.3
NC_018681:5378197:540569354056935406670978Nocardia brasiliensis ATCC 700358 chromosome, complete genomethreonine dehydratase3e-1273.6
NC_014471:1269571:1295882129588212971141233Ignisphaera aggregans DSM 17230 chromosome, complete genomethreonine dehydratase1e-1171.2
NC_003413:37233:383333833339247915Pyrococcus furiosus DSM 3638, complete genomethreonine synthase1e-1068.2
NC_011653:1671910:1673206167320616744171212Thermosipho africanus TCF52B, complete genomethreonine synthase2e-1067.4
NC_009523:5522447:552326955232695524234966Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein7e-0962
NC_008027:4280000:429977642997764300741966Pseudomonas entomophila L48, complete genomethreonine dehydratase8e-0962
NC_007760:3948730:3964874396487439660851212Anaeromyxobacter dehalogenans 2CP-C, complete genomethreonine dehydratase1e-0861.6
NC_013192:1824174:1833585183358518348021218Leptotrichia buccalis DSM 1135, complete genomethreonine dehydratase1e-0861.2
NC_008025:1889891:1910418191041819119621545Deinococcus geothermalis DSM 11300, complete genomethreonine dehydratase, biosynthetic2e-0860.8
NC_013517:104480:1101891101891113941206Sebaldella termitidis ATCC 33386, complete genomethreonine dehydratase2e-0860.5
NC_008698:560529:5639355639355651611227Thermofilum pendens Hrk 5, complete genomethreonine dehydratase7e-0858.9
NC_009484:2442923:246520424652042466130927Acidiphilium cryptum JF-5 chromosome, complete genomethreonine dehydratase1e-0758.2
NC_017353:2353665:2372424237242423734641041Staphylococcus lugdunensis N920143, complete genomeputative threonine dehydratase1e-0758.2
NC_013893:2373730:2394910239491023959501041Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeThreonine dehydratase, catabolic1e-0758.2
NC_014820:1989500:2005985200598520072231239Cenarchaeum symbiosum A, complete genomethreonine synthase2e-0757.4
NC_019962:3577846:3598543359854335998201278Natrinema pellirubrum DSM 15624, complete genomethreonine synthase2e-0757.4
NC_003450:2244862:2244862224486222461721311Corynebacterium glutamicum ATCC 13032, complete genomethreonine dehydratase2e-0757
NC_006958:2214893:2214893221489322162031311Corynebacterium glutamicum ATCC 13032, complete genomethreonine dehydratase2e-0757
NC_016584:593954:5976925976925989031212Desulfosporosinus orientis DSM 765 chromosome, complete genomethreonine dehydratase, medium form2e-0757
NC_010170:1661915:1665364166536416665811218Bordetella petrii, complete genomethreonine dehydratase catabolic2e-0757
NC_014759:1957979:1964634196463419658991266Marivirga tractuosa DSM 4126 chromosome, complete genomethreonine dehydratase3e-0756.6
NC_009464:2687445:2724547272454727257881242Uncultured methanogenic archaeon RC-I, complete genomethreonine synthase5e-0755.8
NC_015160:3448570:3451812345181234530711260Odoribacter splanchnicus DSM 20712 chromosome, complete genomethreonine dehydratase6e-0755.8
NC_012121:1578190:1584304158430415855721269Staphylococcus carnosus subsp. carnosus TM300, complete genomethereonine dehydratase6e-0755.5
NC_015186:2719645:273790427379042738866963Acidiphilium multivorum AIU301, complete genomeputative dehydratase1e-0655.1
NC_003106:922773:9347169347169357291014Sulfolobus tokodaii str. 7, complete genomethreonine synthase2e-0654.3
NC_008319:1272251:1289874128987412914001527Synechococcus sp. CC9311, complete genomethreonine dehydratase2e-0654.3
NC_016943:3270308:3277927327792732792071281Blastococcus saxobsidens DD2, complete genomeThreonine dehydratase biosynthetic2e-0653.9
NC_004463:1520303:153932115393211540304984Bradyrhizobium japonicum USDA 110, complete genomethreonine dehydratase3e-0653.5
NC_007511:1681764:168392516839251684899975Burkholderia sp. 383 chromosome 2, complete sequenceserine/threonine dehydratase3e-0653.5
NC_009255:1890112:189011218901121891089978Burkholderia vietnamiensis G4 chromosome 2, complete sequenceserine/threonine dehydratase3e-0653.5
NC_014221:3068222:309087630908763091868993Truepera radiovictrix DSM 17093 chromosome, complete genomePyridoxal-5'-phosphate-dependent protein beta subunit3e-0653.5
NC_013520:1638000:1658845165884516600681224Veillonella parvula DSM 2008, complete genomethreonine dehydratase3e-0653.5
NC_019842:2134803:2157191215719121584591269Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,threonine dehydratase4e-0653.1
NC_009725:2072475:2099168209916821004361269Bacillus amyloliquefaciens FZB42, complete genomeIlvA4e-0653.1
NC_020410:2068500:2091978209197820932461269Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completethreonine dehydratase4e-0653.1
NC_005061:647567:6570996570996586431545Candidatus Blochmannia floridanus, complete genomethreonine dehydratase5e-0652.4
NC_020908:5047410:5062442506244250634551014Octadecabacter arcticus 238, complete genomethreonine dehydratase7e-0652
NC_008600:2353696:2353696235369623546971002Bacillus thuringiensis str. Al Hakam, complete genomethreonine dehydratase8e-0652
NC_009053:1668500:1668513166851316700391527Actinobacillus pleuropneumoniae L20, complete genomethreonine dehydratase biosynthetic8e-0652
NC_010278:1625695:1625695162569516272211527Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,threonine dehydratase9e-0651.6
NC_013510:888542:8905768905768918171242Thermomonospora curvata DSM 43183, complete genomethreonine synthase9e-0651.6