Pre_GI: BLASTP Hits

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Query: NC_008148:258292:277018 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 277018, End: 277794, Length: 777

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013526:567500:575717575717576511795Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein Cas55e-76284
NC_014650:3438466:343846634384663439200735Geobacillus sp. Y4.1MC1 chromosome, complete genomeCRISPR-associated protein Cas5, Hmari subtype9e-42170
NC_015660:3467579:347010734701073470841735Geobacillus thermoglucosidasius C56-YS93 chromosome, completeCRISPR-associated protein Cas5, Hmari subtype6e-41167
NC_014209:2204515:222023122202312220944714Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein Cas5, Hmari subtype6e-28124
NC_007681:482445:485226485226485933708Methanosphaera stadtmanae DSM 3091, complete genomehypothetical protein5e-25114
NC_014098:2735500:274263327426332743388756Bacillus tusciae DSM 2912 chromosome, complete genomeCRISPR-associated protein Cas53e-22105
NC_015416:2723189:275372927537292754442714Methanosaeta concilii GP-6 chromosome, complete genomeCRISPR-associated protein Cas51e-21103
NC_013799:1117750:112909111290911129852762Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated protein6e-21101
NC_017161:1117741:112894911289491129710762Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated protein Cas56e-21101
NC_014915:332784:343869343869344612744Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein Cas5, Hmari subtype9e-1994
NC_010003:2056000:207776720777672078495729Petrotoga mobilis SJ95, complete genomeCRISPR-associated protein Cas5, Hmari subtype2e-1893.2
NC_012438:776260:792918792918793607690Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated protein Cas5, hmari subtype2e-1892.8
NC_011899:1603500:162857216285721629288717Halothermothrix orenii H 168, complete genomeCRISPR-associated protein Cas58e-1787.4
NC_021184:823000:827469827469828197729Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated protein Cas5, subtype I-B/HMARI5e-1685.1
NC_015387:2072237:207866620786662079356691Marinithermus hydrothermalis DSM 14884 chromosome, complete genome1e-0653.5
NC_019897:3251639:328942732894273290116690Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated protein Cas54e-0652