Pre_GI: BLASTP Hits

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Query: NC_008148:258292:268235 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 268235, End: 269317, Length: 1083

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014221:1541517:1552862155286215539441083Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Cmr3 family2e-105382
NC_013440:1727134:1742241174224117434161176Haliangium ochraceum DSM 14365, complete genomeCRISPR-associated protein, Cmr32e-47190
NC_011901:1860887:1910946191094619121031158Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein4e-44178
NC_013921:755800:7585247585247595941071Thermoanaerobacter italicus Ab9 chromosome, complete genomeCRISPR-associated protein, Cmr3 family3e-23109
NC_014209:787535:7902597902597913291071Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein, Cmr3 family3e-23109
NC_013526:65495:7076970769720311263Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein, Cmr3 family6e-23108
NC_014410:937599:9577489577489588331086Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CRISPR-associated protein, Cmr3 family6e-2098.6
NC_011961:85083:1098181098181108881071Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecrispr-associated protein, Cmr3 family5e-1789
NC_011420:3582500:3598712359871235997821071Rhodospirillum centenum SW, complete genomeCRISPR-associated protein, TM1793 family3e-1583.2
NC_015577:3364985:337754633775463378529984Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein2e-1273.6
NC_000917:1666836:1676488167648816775131026Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein1e-1067.8
NC_015680:691457:7027097027097037791071Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated protein, Cmr3 family1e-0964.3