Pre_GI: BLASTP Hits

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Query: NC_008148:258292:267426 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 267426, End: 268226, Length: 801

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014221:1541517:155394515539451554736792Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family4e-87321
NC_013440:1727134:174124417412441742227984Haliangium ochraceum DSM 14365, complete genomeCRISPR-associated RAMP protein, Cmr4 family6e-53207
NC_015680:691457:704143704143705048906Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family5e-28124
NC_014915:332784:358902358902359795894Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family1e-27123
NC_011420:3582500:359977535997753600671897Rhodospirillum centenum SW, complete genomeCRISPR-associated RAMP protein, putative2e-26119
NC_013526:65495:698696986970765897Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated RAMP protein, Cmr4 family1e-25117
NC_000918:246792:256087256087256986900Aquifex aeolicus VF5, complete genomehypothetical protein5e-24111
NC_011899:1603500:161513716151371616114978Halothermothrix orenii H 168, complete genomeCRISPR-associated RAMP protein, Cmr4 family6e-23108
NC_014410:937599:960049960049961047999Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CRISPR-associated RAMP protein, Cmr4 family2e-22106
NC_020126:10091703:101086421010864210109577936Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated RAMP Cmr4 family protein3e-22105
NC_011653:310000:313493313493314377885Thermosipho africanus TCF52B, complete genomecmr crispr-associated ramp protein, Cmr4 family1e-21103
NC_015387:1898496:191145219114521912306855Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family4e-21102
NC_015577:3364985:337664033766403377533894Treponema azotonutricium ZAS-9 chromosome, complete genomecrispr-associated ramp protein, Cmr4 family1e-20100
NC_014221:1786122:179856817985681799383816Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family3e-2099.4
NC_000917:1666836:1674176167417616752431068Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein3e-2099
NC_014222:575672:575672575672576541870Methanococcus voltae A3 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family4e-2098.6
NC_011961:85083:108893108893109816924Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecrispr-associated ramp protein, Cmr4 family4e-2098.6
NC_017095:1573170:158350615835061584390885Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeCRISPR-associated protein, Cmr4 family2e-1996.7
NC_009972:791702:800286800286801167882Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomeCRISPR-associated RAMP Cmr4 family protein2e-1893.2
NC_008095:8890464:889046488904648891417954Myxococcus xanthus DK 1622, complete genomeCRISPR-associated RAMP protein Cmr45e-1891.7
NC_013894:1:835983599279921Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family2e-1686.3
NC_007759:585264:596348596348597298951Syntrophus aciditrophicus SB, complete genomehypothetical protein2e-1685.9
NC_008789:707916:707916707916708830915Halorhodospira halophila SL1, complete genomeCRISPR-associated RAMP protein, Cmr4 family8e-1684.3
NC_000918:246792:259248259248260135888Aquifex aeolicus VF5, complete genomehypothetical protein1e-1273.6
NC_007333:1743890:182249318224931823395903Thermobifida fusca YX, complete genomeProtein of unknown function DUF3246e-1271.2
NC_015151:1427965:1462542146254214636121071Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family4e-0858.9