Pre_GI: BLASTP Hits

Some Help

Query: NC_008148:258292:267001 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 267001, End: 267426, Length: 426

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014221:1541517:155473315547331555119387Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Cmr5 family2e-25114
NC_013440:1727134:174074117407411741247507Haliangium ochraceum DSM 14365, complete genomeCRISPR-associated protein, Cmr5 family3e-1477.4
NC_013526:65495:694746947469872399Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein, Cmr5 family8e-0855.8