Pre_GI: BLASTP Hits

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Query: NC_008148:258292:265787 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 265787, End: 267004, Length: 1218

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014221:1541517:1555119155511915561591041Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr6 family1e-87323
NC_013440:1727134:1739644173964417407441101Haliangium ochraceum DSM 14365, complete genomeCRISPR-associated RAMP protein, Cmr6 family2e-52206
NC_013526:65495:6805068050694711422Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated RAMP protein, Cmr6 family4e-34145
NC_007759:585264:5977045977045990951392Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein1e-26121
NC_014410:937599:961628961628962497870Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CRISPR-associated RAMP protein, Cmr6 family2e-26120
NC_011961:85083:107516107516108463948Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecrispr-associated protein, Cmr6 family2e-26120
NC_011420:3582500:3601311360131136035932283Rhodospirillum centenum SW, complete genomeCRISPR-associated protein, TM1791 family1e-24114
NC_015577:3364985:3375191337519133762551065Treponema azotonutricium ZAS-9 chromosome, complete genomecrispr-associated ramp protein, Cmr6 family1e-24114
NC_011899:1603500:1613638161363816147681131Halothermothrix orenii H 168, complete genomeCRISPR-associated RAMP protein, Cmr6 family2e-23110
NC_000917:1666836:1672700167270016737311032Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein9e-23108
NC_008789:707916:7092137092137104241212Halorhodospira halophila SL1, complete genomeCRISPR-associated RAMP protein, Cmr6 family3e-21103
NC_007333:1743890:1823864182386418248651002Thermobifida fusca YX, complete genomeCRISPR-associated TM1791 family protein2e-20100
NC_017095:1573170:158236315823631583160798Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeCRISPR-associated protein, Cmr6 family2e-20100
NC_015387:1898496:1910026191002619111021077Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr6 family2e-20100
NC_013894:1:9642964210496855Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr6 family3e-2099.8
NC_000918:246792:2549502549502560711122Aquifex aeolicus VF5, complete genomehypothetical protein2e-1997.4
NC_015680:691457:7055027055027065361035Pyrococcus yayanosii CH1 chromosome, complete genomecrispr-associated ramp protein, Cmr6 family1e-1894.4
NC_011653:310000:312329312329313075747Thermosipho africanus TCF52B, complete genomecrispr-associated ramp protein, Cmr6 family, putative3e-1583.6
NC_009972:791702:798867798867799808942Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomeCRISPR-associated RAMP Cmr6 family protein3e-1583.2
NC_015172:1255956:127718512771851278030846Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr6 family6e-1582.4
NC_009073:1195325:120036612003661201070705Pyrobaculum calidifontis JCM 11548, complete genomeCRISPR-associated RAMP protein, Cmr6 family8e-1582
NC_010525:500804:519949519949520737789Thermoproteus neutrophilus V24Sta, complete genomeCRISPR-associated RAMP protein, Cmr6 family2e-1480.5
NC_020126:10091703:1010715110107151101082331083Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated RAMP Cmr6 family protein1e-1377.8
NC_014221:1786122:1799777179977718008411065Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr6 family2e-1377.4
NC_012622:650361:649582649582650379798Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCmr6 family CRISPR-associated RAMP protein3e-1273.6
NC_011766:755000:762359762359763177819Desulfurococcus kamchatkensis 1221n chromosome, complete genomeCRISPR-associated RAMP protein, Cmr6 family1e-1171.6
NC_015571:260664:263821263821264594774Porphyromonas gingivalis TDC60, complete genomeCRISPR-associated Cmr5 family protein1e-1171.2
NC_010729:2147268:215176321517632152509747Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein1e-1171.2
NC_002950:2068500:207277120727712073532762Porphyromonas gingivalis W83, complete genomeCRISPR-associated TM1791 family protein4e-1169.7
NC_012622:552000:575943575943576782840Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCmr6 family CRISPR-associated RAMP protein3e-1169.7
NC_002754:1782460:180173918017391802593855Sulfolobus solfataricus P2, complete genomehypothetical protein7e-1168.9
NC_012622:681472:690533690533691384852Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCmr6 family CRISPR-associated RAMP protein7e-1168.9
NC_017276:559971:580052580052580903852Sulfolobus islandicus REY15A chromosome, complete genomeCmr6 family CRISPR-associated RAMP protein1e-1067.8
NC_015151:1427965:146559814655981466461864Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr6 family1e-1067.8
NC_016645:743792:744581744581745249669Pyrobaculum sp. 1860 chromosome, complete genomeCmr6 family CRISPR-associated RAMP protein1e-0964.3
NC_009954:1595743:159574315957431596591849Caldivirga maquilingensis IC-167, complete genomeCRISPR-associated RAMP protein, Cmr6 family4e-0963.2
NC_014537:1083961:110351211035121104399888Vulcanisaeta distributa DSM 14429 chromosome, complete genomeCmr6 family CRISPR-associated RAMP protein4e-0962.8