Pre_GI: BLASTP Hits

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Query: NC_008148:2231045:2283414 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2283414, End: 2284196, Length: 783

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014659:1006500:102076610207661021542777Rhodococcus equi 103S, complete genomecyclase4e-77287
NC_015723:2550000:255959625595962560375780Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein2e-61235
NC_015138:3809732:381134538113453812181837Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completecyclase family protein7e-59227
NC_014623:723089:730109730109730930822Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeputative cyclase8e-28124
NC_013171:1336000:134715013471501347884735Anaerococcus prevotii DSM 20548, complete genomecyclase family protein3e-25115
NC_007168:2631535:264437126443712645114744Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein3e-25115
NC_019673:6778401:678980867898086790626819Saccharothrix espanaensis DSM 44229 complete genomeCyclase/dehydrase family protein1e-20100
NC_017068:1327025:135416613541661354933768Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-1892.8
NC_014318:3947845:394784539478453948597753Amycolatopsis mediterranei U32 chromosome, complete genomeputative cyclase5e-1788.2
NC_017186:3947874:394787439478743948626753Amycolatopsis mediterranei S699 chromosome, complete genomecyclase5e-1788.2
NC_008596:4043213:406309340630934063911819Mycobacterium smegmatis str. MC2 155, complete genomecyclase7e-1580.9
NC_009523:5438000:545457254545725455225654Roseiflexus sp. RS-1 chromosome, complete genomecyclase family protein3e-1375.9
NC_013526:105195:127288127288127956669Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomecyclase family protein4e-1375.5
NC_009328:2378345:237990223799022380519618Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein5e-1271.6
NC_018581:759932:784949784949785689741Gordonia sp. KTR9 chromosome, complete genomeputative metal-dependent hydrolase5e-1271.6
NC_008148:1859888:189476218947621895415654Rubrobacter xylanophilus DSM 9941, complete genomeputative cyclase7e-1271.2
NC_017243:3093393:311215531121553112775621Brachyspira intermedia PWS/A chromosome, complete genomecyclase1e-1170.1
NC_014633:583858:584037584037584672636Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencecyclase family protein2e-1169.7
NC_011661:938754:955464955464956111648Dictyoglomus turgidum DSM 6724, complete genomecyclase family protein4e-1168.6
NC_016940:4326000:433217143321714332941771Saprospira grandis str. Lewin chromosome, complete genomecyclase family protein6e-1168.2
NC_020908:2571943:257997225799722580634663Octadecabacter arcticus 238, complete genomeputative cyclase family protein6e-1167.8
NC_017052:1610500:163342716334271634074648Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein9e-1167.4
NC_017039:1610602:163343916334391634086648Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein9e-1167.4
NC_000911:1611500:163441116344111635058648Synechocystis sp. PCC 6803, complete genomehypothetical protein9e-1167.4
NC_016111:6175975:618966961896696190508840Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-1067
NC_009922:411434:414424414424415116693Alkaliphilus oremlandii OhILAs, complete genomecyclase family protein3e-1065.5
NC_016593:2015321:203252620325262033218693Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completecyclase4e-1065.1
NC_012883:1462000:146888614688861469704819Thermococcus sibiricus MM 739, complete genomeCyclase family protein2e-0963.5
NC_014623:7093203:709426170942617095169909Stigmatella aurantiaca DW4/3-1 chromosome, complete genomecyclase family protein4e-0962
NC_013222:1659619:167025816702581671226969Robiginitalea biformata HTCC2501, complete genomehypothetical polyketide cyclase9e-0960.8
NC_014831:1763408:176340817634081764235828Thermaerobacter marianensis DSM 12885 chromosome, complete genomecyclase family protein5e-0858.5
NC_015434:3581001:358014235801423581008867Verrucosispora maris AB-18-032 chromosome, complete genomecyclase family protein1e-0757
NC_011146:4070000:407021640702164070896681Geobacter bemidjiensis Bem, complete genomecyclase family protein1e-0756.6
NC_015958:2527376:254778125477812548416636Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomecyclase family protein2e-0756.6
NC_010725:3992948:401786240178624018563702Methylobacterium populi BJ001, complete genomecyclase family protein2e-0756.2
NC_015733:3736104:377244137724413773034594Pseudomonas putida S16 chromosome, complete genomehypothetical protein4e-0755.1
NC_014328:2588994:260222426022242603015792Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cyclase1e-0653.5
NC_013966:107526:117274117274117957684Haloferax volcanii DS2 plasmid pHV4, complete sequencePutative cyclase superfamily6e-0651.6
NC_013966:399215:420828420828421511684Haloferax volcanii DS2 plasmid pHV4, complete sequencePutative cyclase superfamily6e-0651.6