Pre_GI: BLASTP Hits

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Query: NC_008148:2231045:2259325 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2259325, End: 2260332, Length: 1008

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013524:1207845:1226906122690612279071002Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeProline racemase7e-72271
NC_012658:2641446:2666201266620126672081008Clostridium botulinum Ba4 str. 657 chromosome, complete genomeproline racemase5e-69261
NC_010516:2594159:2598816259881625998231008Clostridium botulinum B1 str. Okra, complete genomeproline racemase4e-69261
NC_012563:2761570:2785140278514027861471008Clostridium botulinum A2 str. Kyoto, complete genomeproline racemase4e-69261
NC_010520:2668702:2673312267331226743191008Clostridium botulinum A3 str. Loch Maree, complete genomeproline racemase4e-69261
NC_009495:2606238:2610771261077126117781008Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeproline racemase4e-69261
NC_009697:2478261:2482884248288424838911008Clostridium botulinum A str. ATCC 19397 chromosome, completeproline racemase4e-69261
NC_009698:2450606:2455229245522924562361008Clostridium botulinum A str. Hall chromosome, complete genomeproline racemase4e-69261
NC_009699:2654672:2659294265929426603011008Clostridium botulinum F str. Langeland chromosome, complete genomeproline racemase4e-69261
NC_017297:2635892:2659443265944326604501008Clostridium botulinum F str. 230613 chromosome, complete genomeproline racemase4e-69261
NC_009089:3782000:3789848378984837908551008Clostridium difficile 630, complete genomeputative proline racemase6e-66251
NC_013315:3613288:3618332361833236193391008Clostridium difficile CD196 chromosome, complete genomeproline racemase6e-66251
NC_017179:3621306:3626350362635036273571008Clostridium difficile BI1, complete genomeproline racemase6e-66251
NC_008148:2231045:2270834227083422718471014Rubrobacter xylanophilus DSM 9941, complete genomeproline racemase2e-65249
NC_014614:2333890:2339192233919223401991008Clostridium sticklandii, complete genomeProline racemase A precursor (TcPRACA) (TcPA45-A) (rTcPA45)7e-62237
NC_016641:2773757:2782839278283927838401002Paenibacillus terrae HPL-003 chromosome, complete genomeproline racemase5e-61234
NC_014815:4621552:4653973465397346549741002Micromonospora sp. L5 chromosome, complete genomeproline racemase2e-58226
NC_013947:4363250:4381353438135343823541002Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeProline racemase9e-58224
NC_016745:546249:5491605491605501611002Oceanimonas sp. GK1 chromosome, complete genomehydroxyproline-2-epimerase2e-50199
NC_010170:1324758:132581013258101326808999Bordetella petrii, complete genomehypothetical protein1e-49197
NC_014934:4834000:4835848483584848368551008Cellulophaga algicola DSM 14237 chromosome, complete genomeproline racemase4e-47188
NC_003305:1035342:105673110567311057729999Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein6e-46184
NC_011883:2031222:2034668203466820356751008Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,proline racemase2e-45182
NC_010511:4258000:427531442753144276285972Methylobacterium sp. 4-46 chromosome, complete genomeproline racemase2e-41170
NC_011894:4013830:403950240395024040473972Methylobacterium nodulans ORS 2060, complete genomeproline racemase3e-41169
NC_015379:4426827:443879244387924439715924Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4-hydroxyproline epimerase6e-41168
NC_016002:2652500:2654016265401626550801065Pseudogulbenkiania sp. NH8B, complete genomeproline racemase2e-37157
NC_007802:1484641:1498924149892414999641041Jannaschia sp. CCS1, complete genomeproline racemase2e-37156
NC_016642:1913432:1923747192374719247721026Pseudovibrio sp. FO-BEG1 chromosome, complete genomeproline racemase4e-36152
NC_011894:4013830:404885040488504049818969Methylobacterium nodulans ORS 2060, complete genomeproline racemase6e-32138
NC_012483:3731542:379978937997893800736948Acidobacterium capsulatum ATCC 51196, complete genomeputative proline racemase1e-27124
NC_020829:809457:812039812039812983945Pseudomonas denitrificans ATCC 13867, complete genomeproline racemase1e-27124
NC_017506:923500:9359189359189369791062Marinobacter adhaerens HP15 chromosome, complete genomeproline racemase2e-27123
NC_020064:1854589:185364218536421854592951Serratia marcescens FGI94, complete genomeproline racemase5e-26118
NC_014841:131308:1482791482791493431065Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceProline racemase1e-21104
NC_014166:1179335:1184831118483111858681038Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeproline racemase2e-1893.6