Pre_GI: BLASTP Hits

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Query: NC_008148:2231045:2258214 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2258214, End: 2258432, Length: 219

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015259:734795:738999738999739505507Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTransposase and inactivated derivatives-like protein2e-1167.8
NC_004757:267165:284101284101284781681Nitrosomonas europaea ATCC 19718, complete genome5e-1166.2
NC_007406:2615916:263376626337662634482717Nitrobacter winogradskyi Nb-255, complete genomeprobable ISRm2011-2 transposase protein1e-1065.5
NC_010505:5496170:550563555056355506210576Methylobacterium radiotolerans JCM 2831, complete genomeputative transposase of insertion sequence2e-1064.3
NC_011894:7563668:759275275927527593273522Methylobacterium nodulans ORS 2060, complete genomeputative transposase of insertion sequence5e-1063.2
NC_011894:672270:684340684340684861522Methylobacterium nodulans ORS 2060, complete genomeputative transposase of insertion sequence5e-1063.2
NC_011894:5751417:575093957509395751460522Methylobacterium nodulans ORS 2060, complete genomeputative transposase of insertion sequence5e-1063.2
NC_011894:6516856:652173665217366522257522Methylobacterium nodulans ORS 2060, complete genomeputative transposase of insertion sequence5e-1063.2
NC_011894:6259649:626238562623856262906522Methylobacterium nodulans ORS 2060, complete genomeputative transposase of insertion sequence5e-1063.2
NC_011894:3988500:398902339890233989544522Methylobacterium nodulans ORS 2060, complete genomeputative transposase of insertion sequence5e-1063.2
NC_011894:6888562:691396669139666914487522Methylobacterium nodulans ORS 2060, complete genomeputative transposase of insertion sequence5e-1063.2
NC_021150:3416450:342987334298733430514642Azotobacter vinelandii CA6, complete genometransposase5e-1063.2
NC_012560:68251:722917229172932642Azotobacter vinelandii DJ, complete genometransposase5e-1063.2
NC_021150:68251:722917229172932642Azotobacter vinelandii CA6, complete genometransposase5e-1063.2
NC_012560:3416451:342987434298743430515642Azotobacter vinelandii DJ, complete genometransposase5e-1063.2
NC_021150:1677811:169869916986991699340642Azotobacter vinelandii CA6, complete genomeTransposase protein5e-1063.2
NC_012560:1677798:169868616986861699327642Azotobacter vinelandii DJ, complete genomeTransposase protein5e-1063.2
NC_012988:1130227:114426511442651144786522Methylobacterium extorquens DM4, complete genome6e-1062.8
NC_012560:3667177:368119336811933681702510Azotobacter vinelandii DJ, complete genometransposase of insertion sequence ISRm10-1, orfB C-terminus protein7e-1062.8
NC_021150:3667176:368119236811923681701510Azotobacter vinelandii CA6, complete genometransposase of insertion sequence ISRm10-1, orfB protein7e-1062.8
NC_009484:318500:330620330620331225606Acidiphilium cryptum JF-5 chromosome, complete genome9e-1062.4
NC_015259:485015:500683500683501105423Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTransposase and inactivated derivatives-like protein1e-0962
NC_010793:357000:361868361868362374507Orientia tsutsugamushi str. Ikeda, complete genometransposase1e-0962
NC_015186:2197236:225219422521942252667474Acidiphilium multivorum AIU301, complete genomeputative transposase1e-0961.6
NC_015186:1126830:113272811327281133201474Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element1e-0961.6
NC_015186:347346:360550360550361023474Acidiphilium multivorum AIU301, complete genomeputative transposase1e-0961.6
NC_010172:4064087:409288340928834093449567Methylobacterium extorquens PA1, complete genometransposase and inactivated derivatives-like protein1e-0961.6
NC_010793:541040:559368559368559706339Orientia tsutsugamushi str. Ikeda, complete genometransposase2e-0961.6
NC_010793:541040:559783559783560289507Orientia tsutsugamushi str. Ikeda, complete genometransposase2e-0961.2
NC_010793:1723365:173974017397401740246507Orientia tsutsugamushi str. Ikeda, complete genometransposase2e-0961.2
NC_012560:898416:902041902041902643603Azotobacter vinelandii DJ, complete genometransposase2e-0961.2
NC_021150:898428:902053902053902655603Azotobacter vinelandii CA6, complete genometransposase2e-0961.2
NC_009937:3748885:375427737542773754918642Azorhizobium caulinodans ORS 571, complete genomeputative transposase of insertion sequence2e-0961.2
NC_007109:401500:409021409021409488468Rickettsia felis URRWXCal2, complete genomeTransposase2e-0961.2
NC_012586:897148:903492903492904145654Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative carboxy-terminus of transposase for insertion sequence NGRIS-7f3e-0960.5
NC_010125:955863:990874990874991347474Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase3e-0960.5
NC_014006:63000:784397843978990552Sphingobium japonicum UT26S chromosome 1, complete genomeputative transposase4e-0960.1
NC_008786:142797:149727149727150200474Verminephrobacter eiseniae EF01-2, complete genomeISRm2011-2 transposase protein5e-0959.7
NC_008786:2809985:281994428199442820417474Verminephrobacter eiseniae EF01-2, complete genomeISRm2011-2 transposase protein5e-0959.7
NC_003911:2540453:255708525570852557660576Silicibacter pomeroyi DSS-3, complete genomeISSpo6, transposase orfB9e-0958.9
NC_021150:1322000:132405013240501324691642Azotobacter vinelandii CA6, complete genometransposase9e-0958.9
NC_012560:1322000:132403813240381324679642Azotobacter vinelandii DJ, complete genometransposase9e-0958.9
NC_008786:1553833:157366515736651574231567Verminephrobacter eiseniae EF01-2, complete genomeISRm2011-2 transposase protein1e-0858.5
NC_003078:671000:676913676913677401489Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative transposase of insertion sequence ISRm10-1, orfB C-terminus protein2e-0858.2
NC_008786:2489104:249611424961142496680567Verminephrobacter eiseniae EF01-2, complete genomeISRm2011-2 transposase protein2e-0858.2
NC_011894:6382636:639886863988686399365498Methylobacterium nodulans ORS 2060, complete genome1e-0858.2
NC_012988:731790:755402755402755746345Methylobacterium extorquens DM4, complete genomehypothetical protein2e-0857.4
NC_012988:4262631:427123642712364271817582Methylobacterium extorquens DM4, complete genome3e-0857.4
NC_016027:1401500:141008314100831410694612Gluconacetobacter xylinus NBRC 3288, complete genometransposase4e-0856.6
NC_008344:2374761:239520823952082395666459Nitrosomonas eutropha C91, complete genomeISRm2011-2 transposase protein6e-0856.2
NC_012988:4262631:427620442762044276779576Methylobacterium extorquens DM4, complete genome9e-0855.8
NC_012988:769981:813522813522814097576Methylobacterium extorquens DM4, complete genome9e-0855.8
NC_008781:330919:343907343907344383477Polaromonas naphthalenivorans CJ2, complete genomeputative transposase of insertion sequence ISRm10-11e-0755.5
NC_009925:6097000:610451661045166105331816Acaryochloris marina MBIC11017, complete genomehypothetical protein2e-0651.2
NC_011884:2422000:242870824287082429280573Cyanothece sp. PCC 7425, complete genometransposase3e-0650.8
NC_007775:1002934:101251510125151013081567Synechococcus sp. JA-3-3Ab, complete genomeISSoc4, transposase orfB4e-0650.1