Pre_GI: BLASTP Hits

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Query: NC_008148:2231045:2256876 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2256876, End: 2257070, Length: 195

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012721:2406874:241881624188162419148333Burkholderia glumae BGR1 chromosome 2, complete genome3e-0857.4
NC_012721:1686450:169030016903001690812513Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase, IS4 family protein3e-0857.4
NC_012720:114489:131206131206131718513Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence3e-0857.4
NC_012723:71637:790607906079572513Burkholderia glumae BGR1 plasmid bglu_1p, complete sequenceTransposase, IS4 family protein3e-0857.4
NC_012723:71637:923769237692741366Burkholderia glumae BGR1 plasmid bglu_1p, complete sequencehypothetical protein9e-0855.8
NC_015381:3457784:349387934938793494430552Burkholderia gladioli BSR3 chromosome 1, complete sequenceTransposase1e-0755.5
NC_008752:3828438:384022538402253840563339Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0755.1
NC_012721:1635999:164307216430721643443372Burkholderia glumae BGR1 chromosome 2, complete genome2e-0754.7
NC_012723:71637:846138461384978366Burkholderia glumae BGR1 plasmid bglu_1p, complete sequencehypothetical protein2e-0754.7
NC_010617:263985:283499283499284167669Kocuria rhizophila DC2201, complete genomeputative transposase4e-0753.1
NC_010002:1879220:192198019219801922318339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein6e-0752.8
NC_010002:3399770:341327334132733413611339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein6e-0752.8
NC_010002:3980832:398613339861333986471339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein6e-0752.8
NC_010002:4890192:489831248983124898650339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein6e-0752.8
NC_010002:3980832:399090239909023991240339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein6e-0752.8
NC_010002:4073724:409164440916444091982339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein6e-0752.8
NC_017186:6395435:642739464273946427792399Amycolatopsis mediterranei S699 chromosome, complete genomeIS4 family transposase9e-0752.4
NC_014318:6395392:642735164273516427749399Amycolatopsis mediterranei U32 chromosome, complete genomeIS4 family transposase9e-0752.4
NC_010002:1879220:192708419270841927506423Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein1e-0652
NC_003296:673790:717424717424717810387Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeIS1421-transposase protein B3e-0650.8
NC_003296:87313:101434101434101820387Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeTIS1421-transposase protein B3e-0650.8
NC_009142:2725000:273820627382062738634429Saccharopolyspora erythraea NRRL 2338, complete genomeIS1647-like transposase3e-0650.4
NC_006513:286549:299420299420299893474Azoarcus sp. EbN1, complete genometransposase, is4 family, fragment5e-0650.1
NC_008752:2056547:206526520652652065786522Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase, IS4 family protein5e-0650.1
NC_009142:2565561:257343925734392573867429Saccharopolyspora erythraea NRRL 2338, complete genometransposase, IS4 family5e-0649.7
NC_008752:558828:565622565622566134513Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase, IS4 family protein5e-0649.7