Pre_GI: BLASTP Hits

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Query: NC_008148:2231045:2237020 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2237020, End: 2237343, Length: 324

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013172:606387:613654613654613962309Brachybacterium faecium DSM 4810, complete genomeTransposase4e-0753.1
NC_015514:3877810:388593838859383886222285Cellulomonas fimi ATCC 484 chromosome, complete genometransposase IS3/IS911 family protein6e-0753.1
NC_015514:181773:189091189091189375285Cellulomonas fimi ATCC 484 chromosome, complete genometransposase IS3/IS911 family protein6e-0753.1
NC_014151:856354:866853866853867140288Cellulomonas flavigena DSM 20109 chromosome, complete genometransposase IS3/IS911 family protein1e-0652
NC_015671:2371632:237891123789112379198288Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein8e-0752.4
NC_015671:3470903:348075434807543481041288Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein1e-0651.6
NC_015671:255808:289243289243289530288Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein1e-0651.6
NC_005125:4062025:406569540656954065997303Gloeobacter violaceus PCC 7421, complete genomeputative transposase3e-0650.4
NC_016109:603829:611817611817612137321Kitasatospora setae KM-6054, complete genomeputative transposase7e-0649.3
NC_013169:2423863:244096624409662441265300Kytococcus sedentarius DSM 20547, complete genomeTransposase4e-0650.1
NC_015635:4097711:412604841260484126341294Microlunatus phosphovorus NM-1, complete genomeputative transposase9e-0752.4
NC_015635:4097711:412481641248164125109294Microlunatus phosphovorus NM-1, complete genomeputative transposase9e-0752.4
NC_015635:5222000:523368052336805233973294Microlunatus phosphovorus NM-1, complete genomeputative transposase orfA for insertion sequence element9e-0752.4
NC_015635:1906790:191244019124401912733294Microlunatus phosphovorus NM-1, complete genomeputative transposase9e-0752.4
NC_015635:3860570:387826238782623878555294Microlunatus phosphovorus NM-1, complete genomeputative transposase orfA for insertion sequence element9e-0752.4
NC_020126:6738959:674953567495356749846312Myxococcus stipitatus DSM 14675, complete genomeIS3 family transposase OrfA7e-0855.8
NC_018524:557666:565290565290565610321Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein8e-0752.4
NC_018524:557666:574471574471575214744Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometransposase family protein6e-0752.8
NC_020911:3159290:316812931681293168404276Octadecabacter antarcticus 307, complete genomeIS3-family transposase7e-0649.3
NC_020911:2998000:304094130409413041216276Octadecabacter antarcticus 307, complete genomeIS3-family transposase7e-0649.3
NC_008148:1859888:188762718876271887923297Rubrobacter xylanophilus DSM 9941, complete genometransposase IS3/IS9111e-22105
NC_014168:1294000:130603013060301306314285Segniliparus rotundus DSM 44985 chromosome, complete genome5e-0649.7
NC_013929:10950:181911819118496306Streptomyces scabiei 87.22 chromosome, complete genometransposase9e-0855.5
NC_013929:3722867:374402537440253744330306Streptomyces scabiei 87.22 chromosome, complete genometransposase subunit1e-0755.5
NC_013595:5221330:523059052305905230877288Streptosporangium roseum DSM 43021, complete genometransposase IS3/IS911 family protein6e-0753.1
NC_014831:2397563:240941324094132409601189Thermaerobacter marianensis DSM 12885 chromosome, complete genome1e-0858.5