Pre_GI: BLASTP Hits

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Query: NC_008148:2053467:2056112 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2056112, End: 2057269, Length: 1158

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015422:3836911:3838447383844738395231077Alicycliphilus denitrificans K601 chromosome, complete genomeABC transporter integral membrane subunit6e-39161
NC_008785:914411:9375709375709387391170Burkholderia mallei SAVP1 chromosome II, complete sequenceABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein1e-38160
NC_012791:2233098:2246354224635422475501197Variovorax paradoxus S110 chromosome 1, complete genomeinner-membrane translocator1e-37157
NC_008786:3323167:3346604334660433476801077Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator2e-37157
NC_009255:1105786:1145385114538511465541170Burkholderia vietnamiensis G4 chromosome 2, complete sequenceinner-membrane translocator4e-37155
NC_010805:575709:5970025970025981711170Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system permease protein4e-37155
NC_010086:1816378:1877133187713318783021170Burkholderia multivorans ATCC 17616 chromosome 2, completeinner-membrane translocator4e-37155
NC_010676:2658495:2678591267859126797601170Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator9e-37154
NC_012724:3222415:3243959324395932451311173Burkholderia glumae BGR1 chromosome 1, complete genomeInner-membrane translocator2e-34147
NC_015957:8103472:8103472810347281052261755Streptomyces violaceusniger Tu 4113 chromosome, complete genomeABC transporter integral membrane subunit2e-34147
NC_008702:4064470:4088347408834740894441098Azoarcus sp. BH72, complete genomeputative branched-chain amino acid transport permease9e-34144
NC_003155:7453994:7473858747385874756331776Streptomyces avermitilis MA-4680, complete genomebranched-chain amino acid ABC transporter permease protein8e-34144
NC_014844:2638994:2656306265630626575981293Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeinner-membrane translocator7e-34144
NC_010557:679656:6929566929566941251170Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceinner-membrane translocator3e-33142
NC_016114:5539021:5560448556044855621781731Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeinner-membrane translocator2e-32140
NC_013510:3324978:3332076333207633332571182Thermomonospora curvata DSM 43183, complete genomeinner-membrane translocator2e-32140
NC_008751:2774000:2792703279270327939261224Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeinner-membrane translocator8e-32138
NC_002937:614000:6191546191546203771224Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched-chain amino acid ABC transporter, permease protein8e-32138
NC_016582:9422650:9440777944077794425161740Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative branched-chain amino acid ABC transporter permease1e-31137
NC_005125:2811986:2850775285077528518841110Gloeobacter violaceus PCC 7421, complete genomebranched-chain amino acid transport protein BraE homolog2e-31137
NC_012108:3824977:3828303382830338301771875Desulfobacterium autotrophicum HRM2, complete genomeABC-type branched-chain amino acid transport system, permease component2e-31136
NC_021177:1736854:1748293174829317501251833Streptomyces fulvissimus DSM 40593, complete genomeBranched chain amino acid transport permease9e-31134
NC_010572:6463939:6486413648641364882091797Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative branched-chain amino acid ABC transporter permease protein2e-30133
NC_015953:1581542:1595003159500315968021800Streptomyces sp. SirexAA-E chromosome, complete genomeinner-membrane translocator3e-30132
NC_016906:3006748:3009121300912130103261206Gordonia polyisoprenivorans VH2 chromosome, complete genomehigh-affinity branched-chain amino acid transport system permease protein BraE6e-30132
NC_008705:3201817:3206705320670532079851281Mycobacterium sp. KMS, complete genomeinner-membrane translocator3e-27122
NC_015499:119200:1449201449201459421023Thermodesulfobium narugense DSM 14796 chromosome, complete genomeABC-type transporter, integral membrane subunit7e-27121
NC_007511:719493:7333997333997346701272Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit5e-24112
NC_015224:279037:2836292836292849151287Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,leucine/isoleucine/valine transporter permease subunit4e-24112
NC_010552:2089140:2090611209061120918821272Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceinner-membrane translocator1e-23111
NC_010515:2358134:2374273237427323755441272Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceinner-membrane translocator1e-23110
NC_011001:2517159:2517929251792925192001272Burkholderia cenocepacia J2315 chromosome 2, complete sequenceleucine/isoleucine/valine transporter permease subunit1e-23110
NC_008543:2035292:2035292203529220365631272Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceinner-membrane translocator2e-23110
NC_008061:428501:4431034431034443741272Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceinner-membrane translocator2e-23110
NC_021066:1393750:1408936140893614102221287Raoultella ornithinolytica B6, complete genomeBranched-chain amino acid transport system permease protein LivM9e-23108
NC_015556:819503:8333088333088345821275Pseudomonas fulva 12-X chromosome, complete genomeinner-membrane translocator5e-22105
NC_005773:694990:6999396999397012521314Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh-affinity branched-chain amino acid ABC transporter, permease protein BraE2e-21103
NC_012658:545840:548918548918549862945Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter permease1e-20101
NC_011297:787932:793781793781794773993Dictyoglomus thermophilum H-6-12, complete genomebranched-chain amino acid ABC transporter permease protein2e-20100
NC_015711:3085038:3109577310957731106411065Myxococcus fulvus HW-1 chromosome, complete genomeputative branched chain amino acid ABC transporter permease2e-20100
NC_011661:961129:964640964640965623984Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator1e-20100
NC_016633:1898234:1897221189722118982371017Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter permease1e-1997.4
NC_007645:1245927:1263558126355812648531296Hahella chejuensis KCTC 2396, complete genomeABC-type branched-chain amino acid transport system, permease component2e-1996.7
NC_015275:566000:5688205688205698991080Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit5e-1995.9
NC_008563:3888232:3888232388823238895091278Escherichia coli APEC O1, complete genomeleucine/isoleucine/valine transporter subunit LivM6e-1995.5
NC_007946:3855445:3855445385544538567221278Escherichia coli UTI89, complete genomehigh-affinity branched-chain amino acid transport system permease protein livM6e-1995.5
NC_011742:3799788:3802980380298038042571278Escherichia coli S88 chromosome, complete genomeleucine/isoleucine/valine transporter permease subunit6e-1995.5
NC_009436:2685910:2689212268921226905011290Enterobacter sp. 638, complete genomeinner-membrane translocator1e-1894.7
NC_013895:1282566:1293495129349512945141020Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete2e-1893.6
NC_010999:252605:268261268261269211951Lactobacillus casei, complete genomeBranched-chain amino acid ABC transporter, permease protein1e-1791.3
NC_008526:250000:268989268989269939951Lactobacillus casei ATCC 334, complete genomePredicted amino acid ABC-type transport system, permease component1e-1791.3
NC_014334:267409:285830285830286780951Lactobacillus casei str. Zhang chromosome, complete genomeputative amino acid ABC transporter permease1e-1791.3
NC_013199:282901:299234299234300184951Lactobacillus rhamnosus Lc 705, complete genomehigh affinity branched-chain amino acid ABC transporter, permease component2e-1790.9
NC_013198:298000:317201317201318151951Lactobacillus rhamnosus GG, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein2e-1790.9
NC_013740:15401:195671956720547981Acidaminococcus fermentans DSM 20731, complete genomeinner-membrane translocator7e-1788.6
NC_011979:3070110:307011030701103071072963Geobacter sp. FRC-32, complete genomeinner-membrane translocator2e-1687
NC_009617:3184924:3216396321639632174481053Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator1e-1480.9
NC_009718:579291:5821335821335838211689Fervidobacterium nodosum Rt17-B1, complete genomeinner-membrane translocator1e-1480.9
NC_007503:2010858:201490820149082015876969Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein3e-1479.7
NC_014153:1663597:1675237167523716762711035Thiomonas intermedia K12 chromosome, complete genomeinner-membrane translocator3e-1376.6
NC_019897:2908971:2913408291340829151981791Thermobacillus composti KWC4 chromosome, complete genomebranched-chain amino acid ABC transporter permease4e-1375.9
NC_018581:3202281:320353832035383204527990Gordonia sp. KTR9 chromosome, complete genomeABC-type branched-chain amino acid transport system, permease component6e-1375.5
NC_014376:3214222:3214222321422232153251104Clostridium saccharolyticum WM1 chromosome, complete genomeinner-membrane translocator9e-1374.7
NC_020291:6426704:644486264448626445827966Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family2e-1273.9
NC_010172:3712000:3731947373194737337281782Methylobacterium extorquens PA1, complete genomeABC transporter related2e-1273.6
NC_012988:4075429:4097873409787340996541782Methylobacterium extorquens DM4, complete genomebranched chain amino acid ABC transporter ATPase/permease3e-1273.2
NC_010725:3992948:4015262401526240170431782Methylobacterium populi BJ001, complete genomeABC transporter related6e-1272
NC_015318:981989:996989996989997915927Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit1e-1171.2
NC_014831:786011:7909667909667921111146Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family7e-1168.6
NC_014098:3133440:3133440313344031344711032Bacillus tusciae DSM 2912 chromosome, complete genomeinner-membrane translocator1e-1067.8
NC_011768:79297:9729197291983641074Desulfatibacillum alkenivorans AK-01, complete genomeinner-membrane translocator2e-1067
NC_017059:469108:4891294891294902501122Rhodospirillum photometricum DSM 122, complete genomeInner-membrane translocator3e-1066.6
NC_016147:2820232:282635928263592827195837Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeinner-membrane translocator4e-1066.2
NC_003454:2080705:209843520984352099292858Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBranched-chain amino acid transport system permease protein livM5e-1065.9
NC_014830:3438504:3477396347739634784031008Intrasporangium calvum DSM 43043 chromosome, complete genomeinner-membrane translocator6e-1065.5
NC_015318:1583839:158961515896151590490876Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit2e-0963.9
NC_010511:6169468:618855961885596189512954Methylobacterium sp. 4-46 chromosome, complete genomeinner-membrane translocator6e-0962.4
NC_017192:1063955:106606210660621067027966Arcobacter sp. L, complete genomebranched-chain amino acid ABC transporter permease component2e-0860.5
NC_008786:4216152:423616342361634237110948Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator4e-0859.7
NC_014210:3763940:377551037755103776499990Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,inner-membrane translocator6e-0858.9
NC_014831:2133060:2170027217002721727202694Thermaerobacter marianensis DSM 12885 chromosome, complete genomeABC transporter related protein9e-0858.5
NC_007604:2555000:257481925748192575742924Synechococcus elongatus PCC 7942, complete genomeputative branched-chain amino acid ABC transporter, permease protein1e-0757.8
NC_013939:913890:930581930581931426846Deferribacter desulfuricans SSM1, complete genomebranched-chain amino acid ABC transporter permease2e-0757.4
NC_004193:701622:719968719968720954987Oceanobacillus iheyensis HTE831, complete genomebranched-chain amino acid ABC transporter permease3e-0757
NC_014931:6203872:6204965620496562060291065Variovorax paradoxus EPS chromosome, complete genomeinner-membrane translocator2e-0757
NC_007298:2947200:296968429696842970646963Dechloromonas aromatica RCB, complete genomeinner-membrane translocator2e-0757
NC_014837:1144500:1166422116642211688902469Pantoea sp. At-9b chromosome, complete genomeABC transporter-like protein5e-0755.8
NC_018524:4049990:406945440694544070437984Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebranched-chain amino acid transport system / permease component family protein1e-0654.7
NC_007963:1582089:160600116060011606945945Chromohalobacter salexigens DSM 3043, complete genomeinner-membrane translocator2e-0653.9
NC_013524:392089:4069004069004088221923Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeABC transporter related protein5e-0652.4