Pre_GI: BLASTP Hits

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Query: NC_008148:1859888:1895543 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1895543, End: 1896406, Length: 864

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:5609770:562589956258995626819921Frankia sp. EAN1pec, complete genomemolybdopterin dehydrogenase FAD-binding1e-52206
NC_015422:4508028:452353745235374524415879Alicycliphilus denitrificans K601 chromosome, complete genomecarbon-monoxide dehydrogenase2e-52206
NC_014831:1763408:177744317774431778345903Thermaerobacter marianensis DSM 12885 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-50199
NC_013523:2560000:256865725686572569529873Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomemolybdopterin dehydrogenase FAD-binding protein4e-50198
NC_020210:1275031:135067513506751351553879Geobacillus sp. GHH01, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-49195
NC_002754:2391867:239955223995522400400849Sulfolobus solfataricus P2, complete genomeCarbon monoxide dehydrogenase, medium chain. (cutB-2)5e-47188
NC_012726:2461102:247231724723172473165849Sulfolobus islandicus M.16.4 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding4e-47188
NC_012632:2564801:257601625760162576864849Sulfolobus islandicus M.16.27 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding1e-46186
NC_012588:2483000:249192324919232492771849Sulfolobus islandicus M.14.25 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding1e-46186
NC_013769:2591065:260059826005982601446849Sulfolobus islandicus L.D.8.5 chromosome, complete genomemolybdopterin dehydrogenase, FAD-binding protein1e-46186
NC_017275:2519637:253085225308522531700849Sulfolobus islandicus HVE10/4 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-46186
NC_017276:2391645:240286024028602403708849Sulfolobus islandicus REY15A chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein3e-46185
NC_012589:2605085:261461826146182615466849Sulfolobus islandicus L.S.2.15, complete genomemolybdopterin dehydrogenase FAD-binding5e-46184
NC_012622:2571812:258342925834292584277849Sulfolobus islandicus Y.G.57.14 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding5e-46184
NC_012623:2680601:269013326901332690981849Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding5e-46184
NC_008578:1827605:184005318400531840940888Acidothermus cellulolyticus 11B, complete genomeCarbon-monoxide dehydrogenase (acceptor)1e-45183
NC_013159:2098500:213999221399922140810819Saccharomonospora viridis DSM 43017, complete genomecarbon monoxide dehydrogenase, medium subunit2e-44179
NC_009142:5425763:544756054475605448447888Saccharopolyspora erythraea NRRL 2338, complete genomecarbon monoxide dehydrogenase medium subunit2e-44179
NC_003106:1786000:180104818010481801899852Sulfolobus tokodaii str. 7, complete genomehypothetical carbon-monoxide dehydrogenase middle subunit3e-44179
NC_014666:3334195:333522433352243336111888Frankia sp. EuI1c chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein9e-42170
NC_012622:786554:794890794890795777888Sulfolobus islandicus Y.G.57.14 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding2e-41169
NC_008701:1607419:162105616210561621874819Pyrobaculum islandicum DSM 4184, complete genomemolybdopterin dehydrogenase, FAD-binding9e-41167
NC_002927:383760:402279402279403148870Bordetella bronchiseptica RB50, complete genomemolybdopterin dehydrogenase3e-39162
NC_014098:2332938:235990023599002360712813Bacillus tusciae DSM 2912 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-36152
NC_009454:1577319:160996416099641610833870Pelotomaculum thermopropionicum SI, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs4e-35148
NC_003911:2540453:254627825462782547132855Silicibacter pomeroyi DSS-3, complete genomecarbon monoxide dehydrogenase, medium subunit5e-34144
NC_010511:637214:657815657815658681867Methylobacterium sp. 4-46 chromosome, complete genomeFAD-binding molybdopterin dehydrogenase9e-34144
NC_015563:3203012:323374732337473234643897Delftia sp. Cs1-4 chromosome, complete genomecarbon-monoxide dehydrogenase1e-32140
NC_016885:1153277:117017511701751171017843Pyrobaculum oguniense TE7 chromosome, complete genomeAerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein3e-29129
NC_009633:712500:721271721271722125855Alkaliphilus metalliredigens QYMF chromosome, complete genomeFAD-binding molybdopterin dehydrogenase8e-29127
NC_009445:7220929:724562872456287246428801Bradyrhizobium sp. ORS 278 chromosome, complete genomecarbon monoxide dehydrogenase medium subunit, coxM-like protein1e-26120
NC_009922:944538:958973958973959827855Alkaliphilus oremlandii OhILAs, complete genomemolybdopterin dehydrogenase FAD-binding1e-25117
NC_016751:1740265:174448117444811745347867Marinitoga piezophila KA3 chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein2e-25116
NC_019978:1022209:103837010383701039281912Halobacteroides halobius DSM 5150, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein3e-25115
NC_014910:2045088:204508820450882045879792Alicycliphilus denitrificans BC chromosome, complete genomecarbon-monoxide dehydrogenase (acceptor)3e-24112
NC_015422:2326942:232694223269422327733792Alicycliphilus denitrificans K601 chromosome, complete genomecarbon-monoxide dehydrogenase3e-24112
NC_014210:2638773:265701926570192657888870Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,molybdopterin dehydrogenase FAD-binding protein4e-24112
NC_016584:432610:435659435659436525867Desulfosporosinus orientis DSM 765 chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein5e-24111
NC_011985:3380842:340330834033083404102795Agrobacterium radiobacter K84 chromosome 1, complete genomexanthine dehydrogenase protein3e-23109
NC_019978:1022209:103433210343321035210879Halobacteroides halobius DSM 5150, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein7e-23107
AC_000091:2976293:300127030012703002148879Escherichia coli W3110 DNA, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
CP002185:3167738:319966331996633200541879Escherichia coli W, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
CP002516:903241:905535905535906413879Escherichia coli KO11, complete genomemolybdopterin dehydrogenase FAD-binding protein5e-22105
NC_011748:3196173:322675532267553227633879Escherichia coli 55989, complete genomexanthine dehydrogenase subunit XdhB5e-22105
NC_010473:3069529:309450630945063095384879Escherichia coli str. K-12 substr. DH10B, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
NC_000913:2975659:300063630006363001514879Escherichia coli K12, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
AP010958:3474077:351022935102293511107879Escherichia coli O103:H2 str. 12009 DNA, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
CU928145:3196173:322675532267553227633879Escherichia coli 55989 chromosome, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
CU928160:3030324:306087030608703061748879Escherichia coli IAI1 chromosome, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
NC_010468:906957:909251909251910129879Escherichia coli ATCC 8739, complete genomemolybdopterin dehydrogenase FAD-binding5e-22105
NC_003364:1463317:1477781147778114791271347Pyrobaculum aerophilum str. IM2, complete genomemolybdopterin binding oxidoreductase small and medium subunit3e-22105
NC_016902:903241:905535905535906413879Escherichia coli KO11FL chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein5e-22105
NC_013364:3552284:358283935828393583717879Escherichia coli O111:H- str. 11128, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
NC_013353:3474077:351022935102293511107879Escherichia coli O103:H2 str. 12009, complete genomexanthine dehydrogenase, FAD-binding subunit5e-22105
NC_012759:2862807:288778428877842888662879Escherichia coli BW2952 chromosome, complete genomexanthine dehydrogenase subunit XdhB5e-22105
NC_011741:3030324:306087030608703061748879Escherichia coli IAI1 chromosome, complete genomexanthine dehydrogenase subunit XdhB5e-22105
NC_011415:3217796:324834032483403249218879Escherichia coli SE11 chromosome, complete genomexanthine dehydrogenase subunit XdhB5e-22105
NC_011750:3407500:342990034299003430778879Escherichia coli IAI39 chromosome, complete genomexanthine dehydrogenase subunit XdhB8e-22104
NC_014328:2588994:259900725990072599843837Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeaerobic-type CO dehydrogenase middle subunit7e-22104
NC_014364:2904443:292381429238142924683870Spirochaeta smaragdinae DSM 11293 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein7e-22104
NC_009801:3175714:320625632062563207134879Escherichia coli E24377A, complete genomexanthine dehydrogenase, FAD-binding subunit6e-22104
NC_010794:2157920:2173305217330521747411437Methylacidiphilum infernorum V4, complete genomeXanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A9e-22103
NC_011751:3285646:332517333251733326051879Escherichia coli UMN026 chromosome, complete genomexanthine dehydrogenase subunit XdhB9e-22103
NC_015519:426948:448574448574449446873Tepidanaerobacter sp. Re1 chromosome, complete genomecarbon-monoxide dehydrogenase3e-21102
NC_002695:3702344:374094537409453741823879Escherichia coli O157:H7 str. Sakai, complete genomeputative dehydrogenase1e-20100
NC_011353:3805819:384534238453423846220879Escherichia coli O157:H7 str. EC4115 chromosome, complete genomexanthine dehydrogenase subunit XdhB1e-20100
NC_013008:3761467:380006838000683800946879Escherichia coli O157:H7 str. TW14359 chromosome, complete genomexanthine dehydrogenase subunit XdhB1e-20100
NC_013941:3540420:356494935649493565827879Escherichia coli O55:H7 str. CB9615 chromosome, complete genomexanthine dehydrogenase FAD-binding subunit1e-20100
NC_007384:3151344:317230931723093173187879Shigella sonnei Ss046, complete genomeputative dehydrogenase3e-2099.4
NC_002655:3769643:380825138082513809129879Escherichia coli O157:H7 EDL933, complete genomeputative dehydrogenase5e-2098.6
NC_014654:2311818:231523523152352316152918Halanaerobium sp. 'sapolanicus' chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-1996.7
NC_010718:2265447:227800722780072278885879Natranaerobius thermophilus JW/NM-WN-LF, complete genomemolybdopterin dehydrogenase FAD-binding3e-1995.9
NC_014654:2311818:231931723193172320192876Halanaerobium sp. 'sapolanicus' chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein1e-1894
NC_015851:10915:224412244123292852Acidithiobacillus caldus SM-1 megaplasmid, complete sequencemolybdopterin dehydrogenase FAD-binding protein8e-1890.9
NC_011761:684969:704982704982705848867Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completexanthine dehydrogenase, FAD-binding protein4e-1788.6
NC_011206:863987:884000884000884866867Acidithiobacillus ferrooxidans ATCC 53993, complete genomemolybdopterin dehydrogenase FAD-binding4e-1788.6
NC_008010:449652:4520514520514534571407Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencemolybdopterin dehydrogenase, FAD-binding7e-1788.2
NC_015559:1478114:1498190149819014996831494Marinomonas posidonica IVIA-Po-181 chromosome, complete genomexanthine dehydrogenase, small subunit9e-1787.4
NC_010501:3987615:4013721401372140151751455Pseudomonas putida W619, complete genomexanthine dehydrogenase, small subunit2e-1686.7
NC_018643:320197:329060329060329845786Alpha proteobacterium HIMB5 chromosome, complete genomeFAD-binding protein similar to molybdopterin dehydrogenase3e-1685.9
NC_008782:3252092:3271749327174932732721524Acidovorax sp. JS42, complete genomemolybdopterin dehydrogenase, FAD-binding3e-1685.9
NC_009922:411434:427484427484428371888Alkaliphilus oremlandii OhILAs, complete genomemolybdopterin dehydrogenase FAD-binding4e-1685.5
NC_006138:1921424:193945919394591940436978Desulfotalea psychrophila LSv54, complete genomeoxidoreductase (molybdopterin binding subunit)9e-1684.3
NC_020126:4622371:4622371462237146261863816Myxococcus stipitatus DSM 14675, complete genomeputative xanthine dehydrogenase7e-1581.3
NC_020829:3434736:3458336345833634597991464Pseudomonas denitrificans ATCC 13867, complete genomemolybdopterin dehydrogenase, FAD-binding protein1e-1480.9
NC_018524:2246225:2279242227924222807051464Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeFAD binding domain in molybdopterin dehydrogenase family protein1e-1480.9
NC_014632:113420:115274115274116155882Ilyobacter polytropus DSM 2926 chromosome, complete genomeFAD-binding molybdopterin dehydrogenase protein2e-1479.7
NC_017955:2327500:234863723486372349491855Modestobacter marinus, complete genomeXanthine dehydrogenase FAD-binding subunit6e-1478.2
NC_010338:4015928:4018260401826040197411482Caulobacter sp. K31, complete genomexanthine dehydrogenase, small subunit6e-1478.2
NC_015567:2420169:2418746241874624201761431Serratia sp. AS9 chromosome, complete genomexanthine dehydrogenase, small subunit4e-1375.5
NC_015566:2420287:2418864241886424202941431Serratia sp. AS12 chromosome, complete genomexanthine dehydrogenase, small subunit4e-1375.5
NC_018515:4196409:422475242247524225630879Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein6e-1375.1
NC_011653:1671910:167191016719101672752843Thermosipho africanus TCF52B, complete genomemedium FAD-binding subunit of molybdenum enzyme1e-1273.9
NC_011757:1146608:114838111483811149331951Methylobacterium chloromethanicum CM4, complete genomemolybdopterin dehydrogenase FAD-binding1e-1273.9
NC_014330:768232:795020795020795871852Brachyspira pilosicoli 95/1000 chromosome, complete genomeCoxM protein2e-1272.8
NC_004557:2607073:262718626271862628091906Clostridium tetani E88, complete genomeputative carbon-monoxide dehydrogenase, middle subunit5e-1271.6
NC_018604:2253539:225780822578082258659852Brachyspira pilosicoli WesB complete genomeCoxM protein5e-1271.6
NC_015953:2681331:270453927045392705402864Streptomyces sp. SirexAA-E chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein6e-1271.6
NC_019908:2401577:242523224252322426083852Brachyspira pilosicoli P43/6/78 chromosome, complete genomeCoxM protein9e-1270.9
NC_020054:3132478:3135383313538331364021020Fibrella aestuarina BUZ 2 drat genomemolybdopterin dehydrogenase FAD-binding protein1e-1170.5
NC_014328:3294086:329916032991603299993834Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative xanthine dehydrogenase subunit3e-1169.3
NC_018515:1354511:136408113640811364923843Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein7e-1168.2
NC_012791:4007780:402646940264694027461993Variovorax paradoxus S110 chromosome 1, complete genomemolybdopterin dehydrogenase FAD-binding2e-1067
NC_013929:6251989:625107262510726251992921Streptomyces scabiei 87.22 chromosome, complete genomeoxidoreductase2e-1066.2
NC_018607:2111581:213834721383472138886540Brachyspira pilosicoli B2904 chromosome, complete genomeCoxM protein8e-1064.3
NC_007778:5079500:510018351001835101169987Rhodopseudomonas palustris HaA2, complete genomeMolybdopterin dehydrogenase, FAD-binding9e-1064.3
NC_009617:2304390:231032723103272311145819Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeFAD-binding molybdopterin dehydrogenase2e-0963.2
NC_014100:1144463:1161699116169911631411443Caulobacter segnis ATCC 21756 chromosome, complete genomexanthine dehydrogenase small subunit2e-0963.2
NC_002696:2829002:2831334283133428327731440Caulobacter crescentus CB15, complete genome3e-0962.4
NC_020063:2230000:224740922474092248359951Enterobacteriaceae bacterium strain FGI 57, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein3e-0962.4
NC_015593:2103815:212584121258412126791951Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeXanthine dehydrogenase1e-0860.5
NC_014150:2994000:299902029990202999871852Brachyspira murdochii DSM 12563 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-0860.1
NC_012225:47800:635486354864390843Brachyspira hyodysenteriae WA1, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM s2e-0859.7
NC_017243:2190000:222868922286892229228540Brachyspira intermedia PWS/A chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM s2e-0756.6
NC_015976:2900891:291718829171882918138951Sphingobium sp. SYK-6, complete genomeputative oxidoreductase4e-0755.8