Pre_GI: BLASTP Hits

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Query: NC_008148:1859888:1862533 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1862533, End: 1862802, Length: 270

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018691:2254566:226965022696502269934285Alcanivorax dieselolei B5 chromosome, complete genomeType I restriction-modification system methyltransferase subunit1e-0858.5
NC_011000:1262324:130417313041731304472300Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein9e-0855.5
NC_011000:2732330:277953527795352779834300Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-0754.3
NC_007651:3064530:313870631387063139005300Burkholderia thailandensis E264 chromosome I, complete sequenceplasmid related protein3e-0753.5
NC_008463:5246954:5295561529556152970121452Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-0753.1
NC_008536:9538891:956975395697539570031279Solibacter usitatus Ellin6076, complete genomeplasmid related protein5e-0753.1
NC_008752:2936933:296358829635882963920333Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein6e-0752.8
NC_009076:3564500:360615336061533606452300Burkholderia pseudomallei 1106a chromosome I, complete sequenceType I restriction-modification system methyltransferase subunit6e-0752.8
NC_019897:3057000:306791730679173068213297Thermobacillus composti KWC4 chromosome, complete genome9e-0752.4
NC_011035:829945:857256857256857597342Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein2e-0651.2
NC_009656:4527457:4620909462090946223541446Pseudomonas aeruginosa PA7 chromosome, complete genomeO-methyl transferase family protein3e-0650.4
NC_009455:173374:192130192130192447318Dehalococcoides sp. BAV1 chromosome, complete genomehypothetical protein4e-0650.1
NC_009998:62000:660286602866327300Shewanella baltica OS195 plasmid pS19501, complete sequencehypothetical protein4e-0650.1
NC_014314:1148000:116335311633531163670318Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein6e-0649.7
NC_013890:191616:201482201482201799318Dehalococcoides sp. GT chromosome, complete genomehypothetical protein7e-0649.3
NC_018080:5091772:5140400514040051418451446Pseudomonas aeruginosa DK2 chromosome, complete genomeO-methyl transferase family protein8e-0648.9