Pre_GI: BLASTP Hits

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Query: NC_008148:1567703:1570582 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1570582, End: 1571805, Length: 1224

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013947:656140:6795396795396806811143Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehistidine kinase2e-1790.9
NC_014960:1697818:1729807172980717309401134Anaerolinea thermophila UNI-1, complete genometwo-component sensor histidine kinase4e-1686.3
NC_009921:3854969:3885817388581738870341218Frankia sp. EAN1pec, complete genomeintegral membrane sensor signal transduction histidine kinase3e-1583.2
NC_015732:140087:1446471446471459841338Spirochaeta caldaria DSM 7334 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase6e-1582
NC_016935:7426389:7438666743866674404591794Paenibacillus mucilaginosus 3016 chromosome, complete genomeresponse regulator7e-1582
NC_010571:2041277:2067947206794720691041158Opitutus terrae PB90-1, complete genomeintegral membrane sensor signal transduction histidine kinase2e-1480.9
NC_006177:520055:5342435342435361441902Symbiobacterium thermophilum IAM 14863, complete genometwo-component sensor histidine kinase2e-1480.5
NC_015690:7334786:7346928734692873483971470Paenibacillus mucilaginosus KNP414 chromosome, complete genomeresponse regulator2e-1480.5
NC_014550:1581812:1616675161667516179071233Arthrobacter arilaitensis Re117, complete genomeputative signal transduction histidine kinase3e-1479.7
NC_009921:8648994:8669977866997786714671491Frankia sp. EAN1pec, complete genomeintegral membrane sensor signal transduction histidine kinase4e-1479.7
NC_003888:4031299:4032042403204240333671326Streptomyces coelicolor A3(2), complete genometwo-component system sensor kinase8e-1478.6
NC_017955:2494640:2513712251371225148511140Modestobacter marinus, complete genometwo component integral membrane sensor signal transduction histidine kinase6e-1375.5
NC_008699:1067855:1070611107061110717891179Nocardioides sp. JS614, complete genomehistidine kinase, dimerisation and phosphoacceptor region2e-1273.9
NC_015690:3883243:3890848389084838926351788Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTwo-component protein Kinase6e-1272.4
NC_016935:1306472:1315873131587313176601788Paenibacillus mucilaginosus 3016 chromosome, complete genomeTwo-component protein Kinase6e-1272.4
NC_009380:4729340:4748874474887447500971224Salinispora tropica CNB-440 chromosome, complete genomehistidine kinase, dimerisation and phosphoacceptor region8e-1272
NC_013131:8029621:8051812805181280530111200Catenulispora acidiphila DSM 44928, complete genomehistidine kinase9e-1271.6
NC_013929:1584906:1603147160314716041541008Streptomyces scabiei 87.22 chromosome, complete genometwo component sensor kinase3e-1169.7
NC_009633:4308016:4308016430801643091221107Alkaliphilus metalliredigens QYMF chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase4e-1169.7
NC_013406:5020690:5023105502310550242111107Paenibacillus sp. Y412MC10 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase4e-1169.7
NC_018868:1271742:1274986127498612762121227Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehistidine kinase4e-1169.7
NC_019771:1356000:1365602136560213715925991Anabaena cylindrica PCC 7122, complete genomemulti-sensor signal transduction multi-kinase4e-1169.3
NC_013406:3672857:3691084369108436928891806Paenibacillus sp. Y412MC10 chromosome, complete genomeLuxR family two component transcriptional regulator7e-1168.9
NC_016935:7426389:7434146743414674359631818Paenibacillus mucilaginosus 3016 chromosome, complete genomeLuxR family two component transcriptional regulator2e-1067
NC_016582:6811273:6826277682627768277011425Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative two-component system sensor kinase4e-1066.2
NC_003272:2560329:2564524256452425673582835Nostoc sp. PCC 7120, complete genometwo-component sensor histidine kinase5e-1065.9
NC_018750:1591895:1609088160908816102331146Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system sensor kinase7e-1065.5
NC_013595:1851226:1862814186281418639681155Streptosporangium roseum DSM 43021, complete genomeHistidine kinase1e-0964.7
NC_009328:448224:4936944936944947191026Geobacillus thermodenitrificans NG80-2 chromosome, complete genometwo-component sensor histidine kinase1e-0964.7
NC_021177:5697210:5720678572067857218771200Streptomyces fulvissimus DSM 40593, complete genomeSensor-histidine kinase2e-0964.3
NC_018750:6132619:615809461580946159080987Streptomyces venezuelae ATCC 10712, complete genometwo-component sensor histidine kinase2e-0964.3
NC_013595:606096:6196566196566207741119Streptosporangium roseum DSM 43021, complete genomeputative two-component system sensor kinase2e-0963.9
NC_015856:4975815:4997349499734949987191371Collimonas fungivorans Ter331 chromosome, complete genomesensor histidine kinase2e-0963.9
NC_013595:196493:1988221988222000961275Streptosporangium roseum DSM 43021, complete genomeSignal transduction histidine kinase-like protein2e-0963.5
NC_014209:1487699:1504499150449915056651167Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,DegS sensor signal transduction histidine kinase3e-0963.2
NC_016943:1314500:1329748132974813308811134Blastococcus saxobsidens DD2, complete genomeTwo component signal transduction histidine kinase4e-0963.2
NC_016114:4333390:4341936434193643432521317Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehistidine kinase dimerization and phosphoacceptor region5e-0962.4
NC_016599:3616204:3632671363267136345481878Owenweeksia hongkongensis DSM 17368 chromosome, complete genomesignal transduction histidine kinase7e-0962
NC_018750:3741581:3758691375869137598181128Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system sensor kinase1e-0861.6
NC_020995:2255521:2256907225690722579741068Enterococcus casseliflavus EC20, complete genometwo-component system sensor histidine kinase2e-0860.8
NC_017955:3731480:3744254374425437455401287Modestobacter marinus, complete genometwo-component integral membrane sensor signal transduction histidine kinase3e-0860.1
NC_013739:717352:7210357210357221741140Conexibacter woesei DSM 14684, complete genomeintegral membrane sensor signal transduction histidine kinase3e-0860.1
NC_014960:1910202:1925461192546119270711611Anaerolinea thermophila UNI-1, complete genomeABC transporter ATP-binding protein3e-0860.1
NC_013521:2193203:2196804219680421980241221Sanguibacter keddieii DSM 10542, complete genomesignal transduction histidine kinase4e-0859.7
NC_016111:2257166:2259667225966722609771311Streptomyces cattleya NRRL 8057, complete genometwo-component system sensor kinase5e-0859.3
NC_021177:2185898:2204422220442222057951374Streptomyces fulvissimus DSM 40593, complete genomeIntegral membrane sensor signal transduction histidine kinase6e-0858.9
NC_019673:1988853:2012554201255420136751122Saccharothrix espanaensis DSM 44229 complete genomeputative histidine kinase8e-0858.5
NC_008752:4665699:4686650468665046880861437Acidovorax avenae subsp. citrulli AAC00-1, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0758.2
NC_013595:3541012:3541674354167435427921119Streptosporangium roseum DSM 43021, complete genomeputative two-component system sensor kinase2e-0757.4
NC_015953:2059083:2077758207775820791791422Streptomyces sp. SirexAA-E chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0757
NC_010086:20876:4489744897462761380Burkholderia multivorans ATCC 17616 chromosome 2, completeintegral membrane sensor signal transduction histidine kinase6e-0755.8
NC_014246:676570:6791626791626803761215Mobiluncus curtisii ATCC 43063 chromosome, complete genomesensor histidine kinase6e-0755.8
NC_010725:3992948:3992948399294839950142067Methylobacterium populi BJ001, complete genomemulti-sensor signal transduction histidine kinase7e-0755.5
NC_009767:5464796:5465677546567754677252049Roseiflexus castenholzii DSM 13941, complete genomeintegral membrane sensor signal transduction histidine kinase7e-0755.5
NC_014355:3951855:3952908395290839540771170Candidatus Nitrospira defluvii, complete genomeputative histidine kinase1e-0654.7
NC_012803:1753138:1772016177201617732421227Micrococcus luteus NCTC 2665, complete genomesignal transduction histidine kinase2e-0653.9
NC_008148:2498000:2526117252611725280391923Rubrobacter xylanophilus DSM 9941, complete genomemulti-sensor signal transduction histidine kinase3e-0653.1
NC_010572:4585500:4598066459806645993851320Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative two-component system sensor kinase5e-0652.8
NC_009664:4347718:4349218434921843505791362Kineococcus radiotolerans SRS30216, complete genomeintegral membrane sensor signal transduction histidine kinase7e-0652