Query: NC_008146:5106775 Mycobacterium sp. MCS, complete genome
Start: 5106775, End: 5131099, Length: 24325
Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008705:5144433* | 5144433 | 5170099 | 25667 | Mycobacterium sp. KMS, complete genome | 0 | 20670 | BLASTN svg | BLASTP svg |
NC_014814:1397429 | 1397429 | 1421567 | 24139 | Mycobacterium sp. Spyr1 chromosome, complete genome | 0 | 2444 | BLASTN svg | BLASTP svg |
NC_009077:4810379 | 4810379 | 4839610 | 29232 | Mycobacterium sp. JLS, complete genome | 0 | 2270 | BLASTN svg | BLASTP svg |
NC_009077:4671417* | 4671417 | 4699507 | 28091 | Mycobacterium sp. JLS, complete genome | 0 | 1927 | BLASTN svg | BLASTP svg |
NC_008595:3914463 | 3914463 | 3935599 | 21137 | Mycobacterium avium 104, complete genome | 0 | 751 | BLASTN svg | BLASTP svg |
NC_014814:1425500* | 1425500 | 1444351 | 18852 | Mycobacterium sp. Spyr1 chromosome, complete genome | 4e-104 | 387 | BLASTN svg | BLASTP svg |
NC_018583:95388 | 95388 | 134611 | 39224 | Gordonia sp. KTR9 plasmid pGKT3, complete sequence | 8e-53 | 216 | BLASTN svg | BLASTP svg |
NC_013441:2788806 | 2788806 | 2822181 | 33376 | Gordonia bronchialis DSM 43247, complete genome | 5e-48 | 200 | BLASTN svg | BLASTP svg |
NC_014814:859124 | 859124 | 900881 | 41758 | Mycobacterium sp. Spyr1 chromosome, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
NC_014550:2562053 | 2562053 | 2594317 | 32265 | Arthrobacter arilaitensis Re117, complete genome | 3e-37 | 165 | BLASTN svg | BLASTP svg |
NC_007777:5087405* | 5087405 | 5111772 | 24368 | Frankia sp. CcI3, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
NC_015957:10403997* | 10403997 | 10427201 | 23205 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 6e-26 | 127 | BLASTN svg | BLASTP svg |
NC_013131:4356247 | 4356247 | 4382381 | 26135 | Catenulispora acidiphila DSM 44928, complete genome | 6e-26 | 127 | BLASTN svg | BLASTP svg |
NC_021177:3598700* | 3598700 | 3618638 | 19939 | Streptomyces fulvissimus DSM 40593, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_018750:3661243* | 3661243 | 3684758 | 23516 | Streptomyces venezuelae ATCC 10712, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_010572:3925803* | 3925803 | 3956287 | 30485 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_014246:876000* | 876000 | 899169 | 23170 | Mobiluncus curtisii ATCC 43063 chromosome, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_013530:3365742* | 3365742 | 3389379 | 23638 | Xylanimonas cellulosilytica DSM 15894, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_015588:2939747* | 2939747 | 2962697 | 22951 | Isoptericola variabilis 225 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_006087:345976* | 345976 | 405679 | 59704 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_013131:10413240* | 10413240 | 10431857 | 18618 | Catenulispora acidiphila DSM 44928, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_010617:558954 | 558954 | 589070 | 30117 | Kocuria rhizophila DC2201, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_008711:3701635* | 3701635 | 3724980 | 23346 | Arthrobacter aurescens TC1, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_018868:1352000* | 1352000 | 1382229 | 30230 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014550:2013422 | 2013422 | 2036954 | 23533 | Arthrobacter arilaitensis Re117, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013947:613774* | 613774 | 633827 | 20054 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007908:1328832* | 1328832 | 1365321 | 36490 | Rhodoferax ferrireducens T118, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007513:1900000* | 1900000 | 1923838 | 23839 | Synechococcus sp. CC9902, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007413:1405817* | 1405817 | 1428117 | 22301 | Anabaena variabilis ATCC 29413, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014657:673500* | 673500 | 694314 | 20815 | Caldicellulosiruptor owensensis OL chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012803:1980955 | 1980955 | 2004182 | 23228 | Micrococcus luteus NCTC 2665, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018870:427357* | 427357 | 447296 | 19940 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015671:2371632* | 2371632 | 2394615 | 22984 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_006177:2943259* | 2943259 | 2965942 | 22684 | Symbiobacterium thermophilum IAM 14863, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |