Pre_GI: BLASTN Hits

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Query: NC_008146:4936262 Mycobacterium sp. MCS, complete genome

Start: 4936262, End: 4955787, Length: 19526

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008705:49754024975402499824322842Mycobacterium sp. KMS, complete genome017280BLASTN svgBLASTP svg
NC_009077:52862755286275531059924325Mycobacterium sp. JLS, complete genome06490BLASTN svgBLASTP svg
NC_018583:953889538813461139224Gordonia sp. KTR9 plasmid pGKT3, complete sequence2e-40174BLASTN svgBLASTP svg
NC_008699:590000*59000061720127202Nocardioides sp. JS614, complete genome1e-35159BLASTN svgBLASTP svg
NC_008699:56500565008084424345Nocardioides sp. JS614, complete genome1e-35159BLASTN svgBLASTP svg
NC_018581:75993275993280124241311Gordonia sp. KTR9 chromosome, complete genome4e-23117BLASTN svgBLASTP svg
NC_013169:47485647485649551820663Kytococcus sedentarius DSM 20547, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009142:55192085519208554891729710Saccharopolyspora erythraea NRRL 2338, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021177:4124839*4124839415343928601Streptomyces fulvissimus DSM 40593, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_011666:15724871572487160176329277Methylocella silvestris BL2, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_014215:22955002295500232183626337Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-1179.8BLASTN svgBLASTP svg
NC_013169:1845735*1845735186893023196Kytococcus sedentarius DSM 20547, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009921:32558333255833327496419132Frankia sp. EAN1pec, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011662:23201002320100236647446375Thauera sp. MZ1T, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008313:19565001956500197559919100Ralstonia eutropha H16 chromosome 1, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_009921:3384116*3384116340895324838Frankia sp. EAN1pec, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010816:62184962184964504823200Bifidobacterium longum DJO10A, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015052:1569255*1569255159297923725Bifidobacterium longum subsp. infantis 157F, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015067:45962645962649282633201Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009921:53315655331565535374522181Frankia sp. EAN1pec, complete genome9e-0660BLASTN svgBLASTP svg
NC_009512:32515453251545327720325659Pseudomonas putida F1, complete genome9e-0660BLASTN svgBLASTP svg
NC_008705:40530704053070407747524406Mycobacterium sp. KMS, complete genome9e-0660BLASTN svgBLASTP svg
NC_008146:40197114019711404299323283Mycobacterium sp. MCS, complete genome9e-0660BLASTN svgBLASTP svg