Query: NC_008146:4936262 Mycobacterium sp. MCS, complete genome
Start: 4936262, End: 4955787, Length: 19526
Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008705:4975402 | 4975402 | 4998243 | 22842 | Mycobacterium sp. KMS, complete genome | 0 | 17280 | BLASTN svg | BLASTP svg |
NC_009077:5286275 | 5286275 | 5310599 | 24325 | Mycobacterium sp. JLS, complete genome | 0 | 6490 | BLASTN svg | BLASTP svg |
NC_018583:95388 | 95388 | 134611 | 39224 | Gordonia sp. KTR9 plasmid pGKT3, complete sequence | 2e-40 | 174 | BLASTN svg | BLASTP svg |
NC_008699:590000* | 590000 | 617201 | 27202 | Nocardioides sp. JS614, complete genome | 1e-35 | 159 | BLASTN svg | BLASTP svg |
NC_008699:56500 | 56500 | 80844 | 24345 | Nocardioides sp. JS614, complete genome | 1e-35 | 159 | BLASTN svg | BLASTP svg |
NC_018581:759932 | 759932 | 801242 | 41311 | Gordonia sp. KTR9 chromosome, complete genome | 4e-23 | 117 | BLASTN svg | BLASTP svg |
NC_013169:474856 | 474856 | 495518 | 20663 | Kytococcus sedentarius DSM 20547, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009142:5519208 | 5519208 | 5548917 | 29710 | Saccharopolyspora erythraea NRRL 2338, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_021177:4124839* | 4124839 | 4153439 | 28601 | Streptomyces fulvissimus DSM 40593, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_011666:1572487 | 1572487 | 1601763 | 29277 | Methylocella silvestris BL2, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_014215:2295500 | 2295500 | 2321836 | 26337 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_013169:1845735* | 1845735 | 1868930 | 23196 | Kytococcus sedentarius DSM 20547, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_003155:5163382* | 5163382 | 5187458 | 24077 | Streptomyces avermitilis MA-4680, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009921:3255833 | 3255833 | 3274964 | 19132 | Frankia sp. EAN1pec, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_011662:2320100 | 2320100 | 2366474 | 46375 | Thauera sp. MZ1T, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008313:1956500 | 1956500 | 1975599 | 19100 | Ralstonia eutropha H16 chromosome 1, complete sequence | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009921:3384116* | 3384116 | 3408953 | 24838 | Frankia sp. EAN1pec, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010816:621849 | 621849 | 645048 | 23200 | Bifidobacterium longum DJO10A, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015052:1569255* | 1569255 | 1592979 | 23725 | Bifidobacterium longum subsp. infantis 157F, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015052:471944 | 471944 | 507366 | 35423 | Bifidobacterium longum subsp. infantis 157F, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015067:459626 | 459626 | 492826 | 33201 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009921:5331565 | 5331565 | 5353745 | 22181 | Frankia sp. EAN1pec, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_009512:3251545 | 3251545 | 3277203 | 25659 | Pseudomonas putida F1, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_008705:4053070 | 4053070 | 4077475 | 24406 | Mycobacterium sp. KMS, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_008146:4019711 | 4019711 | 4042993 | 23283 | Mycobacterium sp. MCS, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |