Pre_GI: BLASTN Hits

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Query: NC_008146:1748026 Mycobacterium sp. MCS, complete genome

Start: 1748026, End: 1806886, Length: 58861

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008705:17521801752180177459922420Mycobacterium sp. KMS, complete genome044430BLASTN svgBLASTP svg
NC_009077:17256831725683177988554203Mycobacterium sp. JLS, complete genome024410BLASTN svgBLASTP svg
NC_008705:17902221790222183895348732Mycobacterium sp. KMS, complete genome024410BLASTN svgBLASTP svg
NC_008726:54910254910257820229101Mycobacterium vanbaalenii PYR-1, complete genome024110BLASTN svgBLASTP svg
NC_014814:16937416937419709927726Mycobacterium sp. Spyr1 chromosome, complete genome023900BLASTN svgBLASTP svg
NC_009077:16873041687304172055433251Mycobacterium sp. JLS, complete genome017270BLASTN svgBLASTP svg
NC_009077:2308634*2308634235649847865Mycobacterium sp. JLS, complete genome013150BLASTN svgBLASTP svg
NC_014814:13240413240415486122458Mycobacterium sp. Spyr1 chromosome, complete genome012590BLASTN svgBLASTP svg
NC_008726:49476949476951509920331Mycobacterium vanbaalenii PYR-1, complete genome09349BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome02656BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome02652BLASTN svgBLASTP svg
NC_014814:3926676*3926676394894522270Mycobacterium sp. Spyr1 chromosome, complete genome02644BLASTN svgBLASTP svg
NC_014814:13974291397429142156724139Mycobacterium sp. Spyr1 chromosome, complete genome02644BLASTN svgBLASTP svg
NC_008611:3579500*3579500360709927600Mycobacterium ulcerans Agy99, complete genome01029BLASTN svgBLASTP svg
NC_008611:10151381015138103966724530Mycobacterium ulcerans Agy99, complete genome01029BLASTN svgBLASTP svg
NC_008611:2615204*2615204263604620843Mycobacterium ulcerans Agy99, complete genome01021BLASTN svgBLASTP svg
NC_008726:61000061000062882018821Mycobacterium vanbaalenii PYR-1, complete genome2e-141511BLASTN svgBLASTP svg
NC_008726:39682223968222399875830537Mycobacterium vanbaalenii PYR-1, complete genome2e-129472BLASTN svgBLASTP svg
NC_002755:34655823465582349023924658Mycobacterium tuberculosis CDC1551, complete genome5e-59238BLASTN svgBLASTP svg
NC_018681:76925607692560771641223853Nocardia brasiliensis ATCC 700358 chromosome, complete genome8e-52214BLASTN svgBLASTP svg
NC_018581:3971303*3971303399035619054Gordonia sp. KTR9 chromosome, complete genome7e-40174BLASTN svgBLASTP svg
NC_015125:1136734*1136734116252925796Microbacterium testaceum StLB037, complete genome6e-34155BLASTN svgBLASTP svg
NC_014318:13201701320170134146221293Amycolatopsis mediterranei U32 chromosome, complete genome2e-33153BLASTN svgBLASTP svg
NC_014168:1724993*1724993175913834146Segniliparus rotundus DSM 44985 chromosome, complete genome4e-29139BLASTN svgBLASTP svg
NC_014391:2875553*2875553290609930547Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-24123BLASTN svgBLASTP svg
NC_008699:22943612294361234337849018Nocardioides sp. JS614, complete genome2e-21113BLASTN svgBLASTP svg
NC_013169:872698726911060923341Kytococcus sedentarius DSM 20547, complete genome3e-20109BLASTN svgBLASTP svg
NC_015588:18475001847500187818330684Isoptericola variabilis 225 chromosome, complete genome3e-20109BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-19105BLASTN svgBLASTP svg
NC_014151:36119563611956366328251327Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_013093:1036772*1036772108759950828Actinosynnema mirum DSM 43827, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_008595:19518871951887197059018704Mycobacterium avium 104, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_015588:20377262037726205909921374Isoptericola variabilis 225 chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_013169:23514752351475238021528741Kytococcus sedentarius DSM 20547, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_019673:1039258*1039258106559926342Saccharothrix espanaensis DSM 44229 complete genome5e-1695.6BLASTN svgBLASTP svg
NC_009077:44190844419084444609827015Mycobacterium sp. JLS, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_014151:856354*85635488191525562Cellulomonas flavigena DSM 20109 chromosome, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_006363:36959369596117324215Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence3e-1489.7BLASTN svgBLASTP svg
NC_006087:676318*67631869499818681Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_006087:345976*34597640567959704Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_006087:28490*284907567147182Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_006087:23750023750026462927130Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_006087:23261432326143235421928077Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_006087:1483761*1483761150739223632Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_014159:37920379205903321114Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete5e-1385.7BLASTN svgBLASTP svg
NC_015588:2939747*2939747296269722951Isoptericola variabilis 225 chromosome, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_014158:2561441*2561441258525523815Tsukamurella paurometabola DSM 20162 chromosome, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_004369:86889086889089511826229Corynebacterium efficiens YS-314, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_006087:177375*17737520205824684Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome3e-1179.8BLASTN svgBLASTP svg
NC_006958:82808982808984892220834Corynebacterium glutamicum ATCC 13032, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_012704:1701805*1701805172422322419Corynebacterium kroppenstedtii DSM 44385, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_008278:61332961332963495421626Frankia alni ACN14a, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_014830:12522491252249128855336305Intrasporangium calvum DSM 43043 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_018583:953889538813461139224Gordonia sp. KTR9 plasmid pGKT3, complete sequence3e-0869.9BLASTN svgBLASTP svg
NC_010617:19103881910388192887618489Kocuria rhizophila DC2201, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_006087:22927912292791231485822068Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_006087:14256821425682144554519864Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008537:13027813027815863428357Arthrobacter sp. FB24 plasmid 1, complete sequence4e-0765.9BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014165:25330402533040256380530766Thermobispora bispora DSM 43833 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014815:65769836576983660151124529Micromonospora sp. L5 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_003450:18178211817821186073042910Corynebacterium glutamicum ATCC 13032, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_006958:1819944*1819944186220242259Corynebacterium glutamicum ATCC 13032, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010572:84939468493946855999966054Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015656:14695011469501148804818548Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015656:3232809*3232809325197319165Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_021177:11871011871013659917890Streptomyces fulvissimus DSM 40593, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014215:22592902259290228320523916Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,7e-0661.9BLASTN svgBLASTP svg
NC_010617:77491477491482823353320Kocuria rhizophila DC2201, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_008543:58212958212961104528917Burkholderia cenocepacia HI2424 chromosome 2, complete sequence7e-0661.9BLASTN svgBLASTP svg
NC_008061:18642821864282188910424823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence7e-0661.9BLASTN svgBLASTP svg