Pre_GI: BLASTP Hits

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Query: NC_008146:4936262:4938281 Mycobacterium sp. MCS, complete genome

Start: 4938281, End: 4939066, Length: 786

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:4975402:497742149774214978206786Mycobacterium sp. KMS, complete genome4-oxalocrotonate decarboxylase5e-150530
NC_009077:5286275:528627552862755287060786Mycobacterium sp. JLS, complete genome4-oxalocrotonate decarboxylase1e-148525
NC_016887:511034:531050531050531835786Nocardia cyriacigeorgica GUH-2, complete genome2-keto-4-pentenoate hydratase 3 (2-hydroxypentadienoic acid hydratase )2e-109395
NC_015565:2027279:204694720469472047720774Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete2-oxopent-4-enoate hydratase7e-63240
NC_016582:2069677:207209920720992072893795Streptomyces bingchenggensis BCW-1 chromosome, complete genome2-oxopent-4-enoate hydratase7e-63240
NC_007503:1111457:113832611383261139114789Carboxydothermus hydrogenoformans Z-2901, complete genomehydratase/decarboxylase family protein9e-63240
NC_021171:2019755:204179920417992042578780Bacillus sp. 1NLA3E, complete genome2-hydroxypenta-2,4-dienoate hydratase1e-62239
NC_015573:649800:649800649800650582783Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome2-oxopent-4-enoate hydratase9e-57220
NC_009328:3241166:325479832547983255583786Geobacillus thermodenitrificans NG80-2 chromosome, complete genome2-hydroxypenta-2,4-dienoate hydratase9e-57220
NC_016584:593954:608817608817609590774Desulfosporosinus orientis DSM 765 chromosome, complete genome2-keto-4-pentenoate hydratase1e-56219
NC_007348:2519447:252177825217782522560783Ralstonia eutropha JMP134 chromosome 2, complete sequence4-oxalocrotonate decarboxylase2e-56219
NC_007951:3631772:363559236355923636401810Burkholderia xenovorans LB400 chromosome 1, complete sequence2-oxopent-4-enoate hydratase3e-55214
NC_007973:1411714:143483514348351435623789Ralstonia metallidurans CH34 chromosome 1, complete sequenceHydratase/decarboxylase2e-54212
NC_016147:1825827:183918318391831839965783Pseudoxanthomonas spadix BD-a59 chromosome, complete genome2-hydroxypenta-2,4-dienoate hydratase9e-53206
NC_016947:1480282:148972514897251490522798Mycobacterium intracellulare MOTT-02 chromosome, complete genome4-oxalocrotonate decarboxylase2e-52205
NC_015136:912276:927357927357928166810Burkholderia sp. CCGE1001 chromosome 1, complete sequence2-oxopent-4-enoate hydratase4e-52204
NC_018697:505915:519330519330520115786Cycloclasticus sp. P1 chromosome, complete genome2-hydroxypent-2,4-dienoate hydratase1e-50199
NC_010645:1341475:135604913560491356852804Bordetella avium 197N, complete genome2-oxo-hept-3-ene-1,7-dioate hydratase3e-50198
NC_016147:1788219:180330618033061804088783Pseudoxanthomonas spadix BD-a59 chromosome, complete genome2-hydroxypenta-2,4-dienoate hydratase5e-50197
NC_014722:193500:214070214070215044975Burkholderia rhizoxinica HKI 454, complete genome2-oxo-hepta-3-ene-1,7-dioic acid hydratase5e-50197
NC_011662:2320100:235137723513772352162786Thauera sp. MZ1T, complete genome2-oxopent-4-enoate hydratase7e-50197
NC_009077:4419084:444432444443244445118795Mycobacterium sp. JLS, complete genome4-oxalocrotonate decarboxylase2e-49196
NC_017506:1100679:114030911403091141094786Marinobacter adhaerens HP15 chromosome, complete genomehydratase/decarboxylase2e-49196
NC_009921:3384116:339976933997693400635867Frankia sp. EAN1pec, complete genome4-oxalocrotonate decarboxylase5e-49194
NC_011892:352652:375312375312376091780Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completefumarylacetoacetate (FAA) hydrolase3e-48192
NC_014118:987889:100352110035211004318798Burkholderia sp. CCGE1002 chromosome chromosome 2, complete2-oxopent-4-enoate hydratase4e-48191
NC_011666:1572487:159618215961821596976795Methylocella silvestris BL2, complete genome4-oxalocrotonate decarboxylase9e-47187
NC_017192:2505369:252665725266572527445789Arcobacter sp. L, complete genome4-oxalocrotonate decarboxylase1e-46186
NC_008699:2294361:230041623004162301231816Nocardioides sp. JS614, complete genome4-oxalocrotonate decarboxylase3e-44178
NC_014974:1076565:110214911021491102925777Thermus scotoductus SA-01 chromosome, complete genome2-keto-4-pentenoate hydratase5e-43174
NC_014831:2133060:213626121362612137052792Thermaerobacter marianensis DSM 12885 chromosome, complete genome2-oxopent-4-enoate hydratase1e-42173
NC_009512:3251545:326685632668563267662807Pseudomonas putida F1, complete genome4-oxalocrotonate decarboxylase1e-42173
NC_016147:1788219:180411318041131804901789Pseudoxanthomonas spadix BD-a59 chromosome, complete genome4-oxalocrotonate decarboxylase2e-42172
NC_017506:1100679:114310411431041143898795Marinobacter adhaerens HP15 chromosome, complete genomehydratase/decarboxylase1e-40166
NC_010125:2813653:282691828269182827715798Gluconacetobacter diazotrophicus PAl 5, complete genomeputative 2-keto-4-pentenoate hydratase2e-40166
NC_018697:505915:522091522091522882792Cycloclasticus sp. P1 chromosome, complete genome4-oxalocrotonate decarboxylase NahK2e-40166
NC_009328:3241166:325205532520553252837783Geobacillus thermodenitrificans NG80-2 chromosome, complete genome4-oxalocrotonate decarboxylase2e-39162
NC_007348:2519447:252258625225862523377792Ralstonia eutropha JMP134 chromosome 2, complete sequence4-oxalocrotonate decarboxylase4e-39161
NC_007973:1411714:143199414319941432782789Ralstonia metallidurans CH34 chromosome 1, complete sequenceHydratase/decarboxylase9e-39160
NC_016604:3137694:314834131483413149144804Mycobacterium rhodesiae NBB3 chromosome, complete genome2-keto-4-pentenoate hydratase2e-37155
NC_016109:2629301:264083126408312641631801Kitasatospora setae KM-6054, complete genomeputative 2-hydroxypenta-2,4-dienoate hydratase3e-36152
NC_007951:3631772:363483136348313635595765Burkholderia xenovorans LB400 chromosome 1, complete sequence4-oxalocrotonate decarboxylase2e-31136
NC_014298:251783:267689267689268456768Halalkalicoccus jeotgali B3 plasmid 1, complete sequence2-oxopent-4-enoate hydratase2e-31136
NC_009077:4419084:444354244435424444327786Mycobacterium sp. JLS, complete genome4-oxalocrotonate decarboxylase2e-29129
NC_011666:1572487:159895415989541599718765Methylocella silvestris BL2, complete genome4-oxalocrotonate decarboxylase3e-29128
NC_016582:2069677:207487720748772075656780Streptomyces bingchenggensis BCW-1 chromosome, complete genome4-oxalocrotonate decarboxylase3e-28125
NC_016947:1480282:149051914905191491304786Mycobacterium intracellulare MOTT-02 chromosome, complete genome4-oxalocrotonate decarboxylase5e-28124
NC_009921:3384116:340425834042583404767510Frankia sp. EAN1pec, complete genomeHydratase/decarboxylase9e-28124
NC_020829:1840281:184028118402811841063783Pseudomonas denitrificans ATCC 13867, complete genomeputative 2-hydroxypent-2,4-dienoate hydratase8e-27120
NC_015136:912276:928163928163928930768Burkholderia sp. CCGE1001 chromosome 1, complete sequence4-oxalocrotonate decarboxylase2e-26119
NC_004193:375416:445317445317446099783Oceanobacillus iheyensis HTE831, complete genome2-hydroxypenta-2,4-dienoate hydratase2e-22106
NC_014974:1076565:109993010999301100625696Thermus scotoductus SA-01 chromosome, complete genome4-oxalocrotonate decarboxylase3e-2098.6
NC_015634:959396:983132983132983893762Bacillus coagulans 2-6 chromosome, complete genomefumarylacetoacetate (FAA) hydrolase4e-1995.1
NC_016023:267581:267581267581268342762Bacillus coagulans 36D1 chromosome, complete genomefumarylacetoacetate (FAA) hydrolase5e-1891.7
NC_014831:2133060:213407221340722134818747Thermaerobacter marianensis DSM 12885 chromosome, complete genomefumarylacetoacetate (FAA) hydrolase7e-1891.3
NC_011894:79282:110557110557111354798Methylobacterium nodulans ORS 2060, complete genomefumarylacetoacetate (FAA) hydrolase6e-1374.7
NC_011894:200928:221341221341222123783Methylobacterium nodulans ORS 2060, complete genomefumarylacetoacetate (FAA) hydrolase9e-0960.8
NC_016027:123853:132256132256133017762Gluconacetobacter xylinus NBRC 3288, complete genome2-oxopent-4-enoate hydratase1e-0757.4
NC_019892:2684793:268775126877512688314564Singulisphaera acidiphila DSM 18658 chromosome, complete genome2e-0653.1
NC_016582:10227196:102599971025999710260311315Streptomyces bingchenggensis BCW-1 chromosome, complete genome2-keto-4-pentenoate hydratase4e-0652