Pre_GI: BLASTP Hits

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Query: NC_008146:3401743:3414290 Mycobacterium sp. MCS, complete genome

Start: 3414290, End: 3414976, Length: 687

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:3430839:344257234425723443258687Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family2e-126451
NC_009077:3376351:338808433880843388770687Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family2e-126451
NC_016947:2380500:238682823868282387337510Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator1e-90332
NC_017904:2353800:236938823693882369912525Mycobacterium sp. MOTT36Y chromosome, complete genometranscriptional regulator1e-87322
NC_009338:4913510:492328449232844923877594Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator1e-71269
NC_016947:1311264:131422113142211314802582Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator2e-1168.9
NC_014666:8016066:804637880463788046989612Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR4e-1065.1
NC_018581:1718023:175613617561361756759624Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator8e-1063.9
NC_017904:1896322:190884219088421909444603Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator6e-0961.2
NC_008595:1349579:136828313682831368876594Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein2e-0859.3
NC_016948:1761020:178541517854151786047633Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein3e-0755.5
NC_014666:8016066:804544580454458046062618Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR1e-0653.5
NC_010628:1734000:174749817474981748085588Nostoc punctiforme PCC 73102, complete genometranscriptional regulator, TetR family1e-0653.1
NC_015564:1199330:121616512161651216800636Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeTetR family transcriptional regulator2e-0653.1
NC_004722:1033000:103607710360771036613537Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, TetR family2e-0653.1
NC_014171:1043961:105084010508401051376537Bacillus thuringiensis BMB171 chromosome, complete genomeTetR family transcriptional regulator2e-0653.1
NC_013235:593289:597854597854598441588Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, TetR family2e-0652.8
NC_015500:2112975:213977921397792140393615Treponema brennaborense DSM 12168 chromosome, complete genomeregulatory protein TetR2e-0652.4
NC_014158:73344:920449204492703660Tsukamurella paurometabola DSM 20162 chromosome, complete genometranscriptional regulator, TetR family3e-0652
NC_019897:1577015:160920016092001609808609Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein7e-0650.8
NC_014815:3790050:380752738075273808105579Micromonospora sp. L5 chromosome, complete genomeregulatory protein tetr8e-0650.4