Pre_GI: BLASTP Hits

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Query: NC_008146:3401743:3412224 Mycobacterium sp. MCS, complete genome

Start: 3412224, End: 3412844, Length: 621

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009077:3376351:338601833860183386638621Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family1e-107388
NC_008705:3430839:344050634405063441126621Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family1e-107388
NC_016947:2380500:238882223888222389403582Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator5e-99360
NC_017904:2353800:237136823713682371985618Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator2e-86318
NC_019673:526000:533907533907534404498Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein8e-1063.5
NC_015953:4908069:491111349111134911553441Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator7e-0960.5
NC_016947:1311264:131422113142211314802582Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_017218:178564:182402182402183001600Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_020126:7661551:768145276814527682090639Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator3e-0652