Pre_GI: BLASTP Hits

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Query: NC_008146:3401743:3406272 Mycobacterium sp. MCS, complete genome

Start: 3406272, End: 3406709, Length: 438

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014640:4193193:420049642004964200894399Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein6e-0856.2
NC_014640:4951076:497862949786294979018390Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein1e-0962
NC_018531:2085939:208847820884782088918441Arthrobacter sp. Rue61a chromosome, complete genomenucleic-acid-binding protein containinga Zn-ribbon2e-0651.2
NC_014098:1258559:126649412664941266907414Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF353e-1580.5
NC_016943:3270308:330152733015273301916390Blastococcus saxobsidens DD2, complete genomehypothetical protein7e-0649.3
NC_002927:3716894:376731237673123767734423Bordetella bronchiseptica RB50, complete genomehypothetical protein8e-1165.9
NC_007953:504939:524735524735525166432Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein3e-0960.8
NC_007953:572926:601264601264601677414Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein1e-0962
NC_008278:175500:187150187150187554405Frankia alni ACN14a, complete genomehypothetical protein1e-0858.5
NC_008278:2863355:288216928821692882570402Frankia alni ACN14a, complete genomehypothetical protein3e-1063.5
NC_008278:2882567:288216928821692882570402Frankia alni ACN14a, complete genomehypothetical protein3e-1063.5
NC_016906:2871272:289160928916092892019411Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein7e-0752.8
NC_018581:3202281:3213616321361632152891674Gordonia sp. KTR9 chromosome, complete genomeAcetyl-CoA acetyltransferase5e-0649.7
NC_018581:4992952:499992049999205000363444Gordonia sp. KTR9 chromosome, complete genomeputative nucleic-acid-binding protein3e-0960.8
NC_009654:4716417:473844847384484738885438Marinomonas sp. MWYL1, complete genomehypothetical protein6e-0959.7
NC_000909:1517461:152831815283181528743426Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein1e-1065.1
NC_009135:330628:338195338195338587393Methanococcus maripaludis C5, complete genomeprotein of unknown function DUF353e-1063.9
NC_009637:438037:469568469568469960393Methanococcus maripaludis C7 chromosome, complete genomehypothetical protein5e-0959.7
NC_015847:1261276:128771612877161288108393Methanococcus maripaludis XI chromosome, complete genomehypothetical protein4e-1063.5
NC_003901:1027183:102782710278271028225399Methanosarcina mazei Go1, complete genomehypothetical protein5e-1166.6
NC_015562:1460124:147704114770411477436396Methanotorris igneus Kol 5 chromosome, complete genomehypothetical protein7e-1166.2
NC_008595:2661019:267867826786782679112435Mycobacterium avium 104, complete genomehypothetical protein1e-1272
NC_009338:630130:655555655555656013459Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-0962
NC_009338:555587:581871581871582329459Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-0962
NC_016947:2380500:239491823949182395355438Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein1e-78291
NC_016604:3184855:319610031961003196558459Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative nucleic-acid-binding protein containing a Zn-ribbon1e-0962
NC_015576:4070195:407976940797694080182414Mycobacterium sp. JDM601 chromosome, complete genomehypothetical protein5e-0856.6
NC_009077:5286275:530610253061025307055954Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF354e-0650.1
NC_009077:1725683:174788617478861748344459Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF351e-0962
NC_009077:3376351:338006633800663380503438Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF351e-78291
NC_008705:3430839:343455434345543434991438Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF351e-78291
NC_008705:1790222:181242518124251812883459Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF351e-0962
NC_008705:4975402:499248949924894993445957Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF354e-0650.1
NC_008146:4936262:495483149548314955787957Mycobacterium sp. MCS, complete genomeprotein of unknown function DUF354e-0650.1
NC_017904:5543490:555315055531505553575426Mycobacterium sp. MOTT36Y chromosome, complete genomeacyl dehydratase8e-0752.4
NC_014814:169374:190911190911191369459Mycobacterium sp. Spyr1 chromosome, complete genomenucleic-acid-binding protein containing a Zn-ribbon8e-1372.4
NC_008726:549102:572743572743573201459Mycobacterium vanbaalenii PYR-1, complete genomeprotein of unknown function DUF351e-0962
NC_015684:3157941:316332031633203163718399Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein4e-1063.5
NC_015379:2505233:252861225286122529025414Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-1685.1
NC_015312:1893945:190847219084721908936465Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein9e-1268.9
NC_015312:681678:683879683879684283405Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein6e-0856.2
NC_016147:2820232:283484428348442835212369Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein5e-1269.7
NC_003413:916398:933469933469933879411Pyrococcus furiosus DSM 3638, complete genomehypothetical protein4e-1063.5
NC_000961:597385:600840600840601244405Pyrococcus horikoshii OT3, complete genomehypothetical protein4e-1167
NC_015474:1185478:118677411867741187178405Pyrococcus sp. NA2 chromosome, complete genomeacaC protein1e-1065.5
NC_015680:21500:389103891039314405Pyrococcus yayanosii CH1 chromosome, complete genomeacaC protein2e-0961.6
NC_007974:2097334:215465421546542155127474Ralstonia metallidurans CH34 chromosome 2, complete sequenceprotein of unknown function DUF352e-0754.3
NC_012522:7763426:777773277777327778145414Rhodococcus opacus B4, complete genomehypothetical protein5e-0649.7
NC_003155:5163382:516607551660755167025951Streptomyces avermitilis MA-4680, complete genomehypothetical protein1e-0858.5
NC_021177:4124839:4142776414277641438161041Streptomyces fulvissimus DSM 40593, complete genomeDUF35 multi-domain protein3e-0857.4
NC_012589:260703:275932275932276288357Sulfolobus islandicus L.S.2.15, complete genomeprotein of unknown function DUF356e-0753.1
NC_012588:2483000:250044125004412500824384Sulfolobus islandicus M.14.25 chromosome, complete genomehypothetical protein1e-0755.1
NC_012632:243982:263003263003263359357Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein4e-0753.5
NC_012632:2564801:258453425845342584917384Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein1e-0755.1
NC_012726:255774:273583273583273939357Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein3e-0753.9
NC_012623:2555000:256971425697142570070357Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein1e-0755.1