Pre_GI: BLASTP Hits

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Query: NC_008146:3401743:3405232 Mycobacterium sp. MCS, complete genome

Start: 3405232, End: 3406254, Length: 1023

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016947:2380500:2395352239535223963951044Mycobacterium intracellulare MOTT-02 chromosome, complete genomeluciferase family protein2e-176618
NC_008705:3430839:3433514343351434345361023Mycobacterium sp. KMS, complete genomeluciferase family protein4e-176617
NC_009077:3376351:3379026337902633800481023Mycobacterium sp. JLS, complete genomeluciferase family protein4e-176617
NC_014814:1425500:1426123142612314271721050Mycobacterium sp. Spyr1 chromosome, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase3e-136484
NC_009338:4869700:4876172487617248772211050Mycobacterium gilvum PYR-GCK chromosome, complete genomeluciferase family protein2e-135482
NC_009077:4810379:4812151481215148132001050Mycobacterium sp. JLS, complete genomeluciferase family protein2e-135482
NC_008595:2546696:257861725786172579612996Mycobacterium avium 104, complete genome5,10-methylenetetrahydromethanopterin reductase2e-38159
NC_016948:3104403:311090131109013111896996Mycobacterium intracellulare MOTT-64 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase9e-37154
NC_009511:1781914:1795948179594817969971050Sphingomonas wittichii RW1 chromosome, complete genomecoenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein1e-21104
NC_007333:1129826:1147650114765011486871038Thermobifida fusca YX, complete genomeputative oxidoreductase4e-21102
NC_015656:2433370:2454868245486824559051038Frankia symbiont of Datisca glomerata chromosome, complete genomeputative F420-dependent oxidoreductase5e-2099
NC_016906:1458158:147728314772831478281999Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative F420-dependent oxidoreductase1e-1997.4
NC_013407:146000:162714162714163709996Methanocaldococcus vulcanius M7, complete genome5,10-methylenetetrahydromethanopterin reductase3e-1789.7
NC_016111:5515462:5532511553251155335601050Streptomyces cattleya NRRL 8057, complete genomeFMN-dependent monooxygenase1e-1687.4
NC_013159:2098500:2135470213547021365251056Saccharomonospora viridis DSM 43017, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase1e-1687.4
NC_011896:427660:4382714382714393231053Mycobacterium leprae Br4923, complete genomeputative coenzyme F420-dependent oxidoreductase3e-1686.3
NC_002677:427500:4382624382624393141053Mycobacterium leprae TN, complete genomepossible coenzyme F420-dependent oxidoreductase3e-1686.3
NC_016943:4145981:4158195415819541592351041Blastococcus saxobsidens DD2, complete genomeputative Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase4e-1685.9
NC_014122:143446:148423148423149418996Methanocaldococcus infernus ME chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase4e-1685.9
NC_014210:3817948:3836203383620338372431041Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,putative F420-dependent oxidoreductase6e-1685.5
NC_015562:1299648:130121013012101302205996Methanotorris igneus Kol 5 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase5e-1685.5
NC_006361:3615322:3628865362886536299021038Nocardia farcinica IFM 10152, complete genomeputative oxidoreductase5e-1685.5
NC_020133:142790:1453311453311463711041Mycobacterium liflandii 128FXT, complete genomecoenzyme F420-dependent oxidoreductase2e-1583.2
NC_013849:627811:645634645634646632999Ferroglobus placidus DSM 10642 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase9e-1581.3
NC_003551:478065:4872644872644883131050Methanopyrus kandleri AV19, complete genomemethylenetetrahydromethanopterin reductase2e-1480.1
NC_013757:4707960:4732534473253447335741041Geodermatophilus obscurus DSM 43160, complete genomeputative F420-dependent oxidoreductase3e-1479.7
NC_014253:2113233:213386221338622134848987Methanohalobium evestigatum Z-7303 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase9e-1478.2
NC_017955:4888990:4914847491484749158871041Modestobacter marinus, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase1e-1377.4
NC_012669:96966:1135891135891146291041Beutenbergia cavernae DSM 12333, complete genomeLuciferase-like monooxygenase3e-1376.3
NC_013523:2560000:2577966257796625790451080Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeLuciferase-like monooxygenase2e-1273.9
NC_016582:10227196:1027079110270791102718191029Streptomyces bingchenggensis BCW-1 chromosome, complete genomeluciferase family protein9e-1271.2
NC_021177:7815791:783722278372227838139918Streptomyces fulvissimus DSM 40593, complete genomeHydride transferase 11e-1171.2
NC_013757:2659930:2678214267821426792541041Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein7e-1168.6
NC_007777:2749422:2769013276901327700681056Frankia sp. CcI3, complete genomeluciferase-like7e-1168.6
NC_008595:1911491:1922014192201419230751062Mycobacterium avium 104, complete genomehypothetical protein6e-1168.6
NC_015556:1188500:1204970120497012060401071Pseudomonas fulva 12-X chromosome, complete genomeLuciferase-like, subgroup2e-1067
NC_015574:1970967:198397119839711984936966Methanobacterium sp. SWAN-1 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase2e-1067
NC_014830:3438504:3463866346386634650021137Intrasporangium calvum DSM 43043 chromosome, complete genomeLuciferase-like, subgroup2e-1067
NC_014165:2888961:2906558290655829081891632Thermobispora bispora DSM 43833 chromosome, complete genomeluciferase-like monooxygenase3e-1066.2
NC_012669:96966:116343116343117266924Beutenbergia cavernae DSM 12333, complete genomeLuciferase-like monooxygenase3e-1066.2
NC_008271:35909:5945859458604651008Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencepossible F420-dependent glucose-6-phosphate dehydrogenase9e-1064.7
NC_012522:7763426:776703377670337768016984Rhodococcus opacus B4, complete genomeputative oxidoreductase1e-0964.3
NC_002677:332923:3530073530073540171011Mycobacterium leprae TN, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase2e-0963.5
NC_011896:332939:3530233530233540331011Mycobacterium leprae Br4923, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase2e-0963.5
NC_016604:1285277:1306137130613713071471011Mycobacterium rhodesiae NBB3 chromosome, complete genomeglucose-6-phosphate dehydrogenase (coenzyme-F420)3e-0963.2
NC_008278:925231:939757939757940668912Frankia alni ACN14a, complete genomehypothetical protein3e-0963.2
NC_008268:2313583:2314567231456723155741008Rhodococcus sp. RHA1, complete genomeprobable 5,10-methylenetetrahydromethanopterin reductase6e-0962
NC_010612:835648:8529698529698539791011Mycobacterium marinum M, complete genomeF420-dependent glucose-6-phosphate dehydrogenase Fgd16e-0962
NC_014815:841484:856510856510857466957Micromonospora sp. L5 chromosome, complete genomef420-dependent oxidoreductase7e-0961.6
NC_003888:5443832:545801954580195458891873Streptomyces coelicolor A3(2), complete genomeoxidoreductase2e-0860.5
NC_015671:3153325:317564031756403176575936Cellvibrio gilvus ATCC 13127 chromosome, complete genomeputative F420-dependent oxidoreductase2e-0860.1
NC_009921:3419978:343679634367963437671876Frankia sp. EAN1pec, complete genomeluciferase family protein3e-0860.1
NC_008271:140846:1615081615081625211014Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable glucose-6-phosphate 1-dehydrogenase3e-0859.7
NC_014507:2196539:219954921995492200547999Methanoplanus petrolearius DSM 11571 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase3e-0859.7
NC_010501:2511887:2513631251363125146741044Pseudomonas putida W619, complete genomeluciferase family protein4e-0859.3
NC_013131:8480384:852485585248558525784930Catenulispora acidiphila DSM 44928, complete genomeLuciferase-like monooxygenase4e-0859.3
NC_015957:5136500:513912751391275140086960Streptomyces violaceusniger Tu 4113 chromosome, complete genomeluciferase-like protein5e-0858.9
NC_003155:921494:929152929152930075924Streptomyces avermitilis MA-4680, complete genomemonooxygenase9e-0858.2
NC_012522:2031786:2033292203329220342991008Rhodococcus opacus B4, complete genomeF420-dependent glucose-6-phosphate dehydrogenase9e-0858.2
NC_013849:19404:4081540815418311017Ferroglobus placidus DSM 10642 chromosome, complete genomeLuciferase-like, subgroup1e-0757.8
NC_015848:483500:5011525011525021621011Mycobacterium canettii CIPT 140010059, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase FGD11e-0757.8
NC_000962:475816:4907834907834917931011Mycobacterium tuberculosis H37Rv, complete genomePROBABLE F420-DEPENDENT GLUCOSE-6-PHOSPHATE DEHYDROGENASE FGD11e-0757.4
NC_012207:477500:4919314919314929411011Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase1e-0757.4
NC_008769:507000:5215985215985226081011Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative f420-dependent glucose-6-phosphate dehydrogenase fgd11e-0757.4
NC_002755:472872:4922324922324932421011Mycobacterium tuberculosis CDC1551, complete genomeglucose-6-phosphate dehydrogenase, F420-dependent1e-0757.4
NC_009565:479500:4939534939534949631011Mycobacterium tuberculosis F11, complete genomeF420-dependent glucose-6-phosphate dehydrogenase fgd11e-0757.4
NC_009525:477093:4920934920934931031011Mycobacterium tuberculosis H37Ra, complete genomeputative f420-dependent glucose-6-phosphate dehydrogenase Fgd11e-0757.4
NC_002945:476835:4918024918024928121011Mycobacterium bovis AF2122/97, complete genomeF420-dependent glucose-6-phosphate dehydrogenase1e-0757.4
NC_012943:476500:4910424910424920521011Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase1e-0757.4
NC_016768:476500:4910424910424920521011Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase fgd11e-0757.4
NC_016804:477500:4919324919324929421011Mycobacterium bovis BCG str. Mexico chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase1e-0757.4
NC_013790:756000:758519758519759475957Methanobrevibacter ruminantium M1 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase Mer2e-0757
NC_019950:481881:4971714971714981811011Mycobacterium canettii CIPT 140060008 complete genomeF420-dependent glucose-6-phosphate dehydrogenase Fgd12e-0756.6
NC_009921:3999040:4006202400620240072151014Frankia sp. EAN1pec, complete genomeluciferase family protein3e-0756.2
NC_008595:1349579:136233713623371363267931Mycobacterium avium 104, complete genome4e-0756.2
NC_009921:3854969:386077538607753861689915Frankia sp. EAN1pec, complete genomeluciferase family protein7e-0755.1
NC_007355:499764:5060865060865071141029Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceF420-dependent glucose-6-phosphate dehydrogenase9e-0754.7
NC_009921:8648994:865596786559678656896930Frankia sp. EAN1pec, complete genomeluciferase family protein1e-0654.3
NC_008596:4152916:4168736416873641698061071Mycobacterium smegmatis str. MC2 155, complete genomealkanal monooxygenase1e-0654.3
NC_019950:3306419:3324033332403333251781146Mycobacterium canettii CIPT 140060008 complete genomePutative oxidoreductase1e-0654.3
NC_015848:3343731:3359724335972433608691146Mycobacterium canettii CIPT 140010059, complete genomeputative oxidoreductase1e-0654.3
NC_008596:2873675:287367528736752874541867Mycobacterium smegmatis str. MC2 155, complete genomehydride transferase 11e-0654.3
NC_009380:4702815:472372647237264724616891Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein2e-0653.5
NC_010801:550270:576968576968577951984Burkholderia multivorans ATCC 17616 chromosome 3, completefavin-dependent monooxygenase2e-0653.5
NC_010087:319063:346907346907347890984Burkholderia multivorans ATCC 17616 chromosome 3, completeluciferase family protein2e-0653.5
NC_009565:3299937:3314576331457633157211146Mycobacterium tuberculosis F11, complete genomehypothetical oxidoreductase2e-0653.5
NC_009525:3300456:3315095331509533162401146Mycobacterium tuberculosis H37Ra, complete genomeN5,N10-methylenetetrahydromethanopterin reductase-related protein2e-0653.5
NC_008769:3242453:3257264325726432584091146Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative oxidoreductase2e-0653.5
NC_012207:3237440:3250091325009132512361146Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative oxidoreductase2e-0653.5
NC_002945:3246278:3259791325979132609361146Mycobacterium bovis AF2122/97, complete genomeoxidoreductase2e-0653.5
NC_000962:3288464:3303103330310333042481146Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE OXIDOREDUCTASE2e-0653.5
NC_016804:3221818:3236629323662932377741146Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative oxidoreductase2e-0653.5
NC_017026:3282405:3297048329704832981931146Mycobacterium tuberculosis RGTB327 chromosome, complete genomeoxidoreductase2e-0653.5
NC_011896:173197:1754681754681766161149Mycobacterium leprae Br4923, complete genomeputative oxidoreductase2e-0653.5
NC_002677:173170:1754411754411765891149Mycobacterium leprae TN, complete genomeputative oxidoreductase2e-0653.5
NC_009953:3426344:342932634293263430213888Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein3e-0653.1
NC_007434:2449721:2472769247276924738121044Burkholderia pseudomallei 1710b chromosome I, complete sequenceGlucose-6-phosphate dehydrogenase (coenzyme F420)3e-0653.1
NC_016582:6509792:652535565253556526248894Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0653.1
NC_015656:3200500:3210190321019032112871098Frankia symbiont of Datisca glomerata chromosome, complete genomeluciferase-like protein3e-0652.8
NC_002755:3282785:3297424329742432985691146Mycobacterium tuberculosis CDC1551, complete genomeN5,N10-methylenetetrahydromethanopterin reductase-related protein3e-0652.8
NC_015957:5082172:5086986508698650880471062Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative F420-dependent oxidoreductase5e-0652.4
NC_002947:2809591:283166628316662832649984Pseudomonas putida KT2440, complete genomehypothetical protein5e-0652.4
NC_013530:423540:4431224431224453832262Xylanimonas cellulosilytica DSM 15894, complete genomeFAD linked oxidase domain protein6e-0652
NC_010170:1219641:1235538123553812365421005Bordetella petrii, complete genomeputative monooxygenase8e-0651.6