Pre_GI: BLASTP Hits

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Query: NC_008146:3401743:3404781 Mycobacterium sp. MCS, complete genome

Start: 3404781, End: 3405239, Length: 459

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:3430839:343306334330633433521459Mycobacterium sp. KMS, complete genomeMaoC domain protein dehydratase2e-72270
NC_009077:3376351:337857533785753379033459Mycobacterium sp. JLS, complete genomeMaoC domain protein dehydratase2e-72270
NC_016947:2380500:239645423964542396846393Mycobacterium intracellulare MOTT-02 chromosome, complete genomedehydratase1e-59228
NC_014834:2264108:229552422955242295970447Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein2e-1271.6
NC_008268:3162824:317784131778413178296456Rhodococcus sp. RHA1, complete genomehypothetical protein3e-1063.9
NC_010572:3363830:338583933858393386291453Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-0962
NC_012522:7763426:776524077652407765689450Rhodococcus opacus B4, complete genomehypothetical protein2e-0961.6
NC_016906:2871272:287752028775202877963444Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein6e-0959.7
NC_015957:639774:659685659685660155471Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-0858.9
NC_003888:5042283:506185950618595062311453Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0858.5
NC_008595:2687245:268681426868142687248435Mycobacterium avium 104, complete genomehypothetical protein2e-0858.2
NC_016114:3008500:300902330090233009475453Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeacyl dehydratase MaoC8e-0856.2
NC_013929:4186840:420456442045644205016453Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0754.7
NC_015172:1120000:112200611220061122467462Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMaoC domain protein dehydratase6e-0753.1
NC_016109:3591401:361608936160893616547459Kitasatospora setae KM-6054, complete genomeputative fatty acid synthase1e-0652.4
NC_014640:4193193:419984441998444200290447Achromobacter xylosoxidans A8 chromosome, complete genomeacyl dehydratase4e-0650.1