Pre_GI: BLASTP Hits

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Query: NC_008146:3401743:3404359 Mycobacterium sp. MCS, complete genome

Start: 3404359, End: 3404784, Length: 426

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016947:2380500:239684323968432397268426Mycobacterium intracellulare MOTT-02 chromosome, complete genomedehydratase3e-76283
NC_009077:3376351:337815333781533378578426Mycobacterium sp. JLS, complete genomeMaoC domain protein dehydratase3e-76283
NC_008705:3430839:343264134326413433066426Mycobacterium sp. KMS, complete genomeMaoC domain protein dehydratase3e-76283
NC_008595:2687245:268724526872452687730486Mycobacterium avium 104, complete genomeMaoC like domain, putative1e-28125
NC_012522:7763426:776482177648217765243423Rhodococcus opacus B4, complete genomeputative beta-hydroxyacyl-[acyl-carrier- protein] dehydratase subunit2e-28124
NC_016906:2871272:287709528770952877499405Gordonia polyisoprenivorans VH2 chromosome, complete genomeMaoC-like dehydratase4e-24110
NC_014834:2264108:229510522951052295527423Rhodopseudomonas palustris DX-1 chromosome, complete genomeMaoC domain-containing protein dehydratase4e-2096.7
NC_009511:1781914:178974817897481790173426Sphingomonas wittichii RW1 chromosome, complete genomedehydratase3e-1890.9
NC_014831:2133060:216688821668882167340453Thermaerobacter marianensis DSM 12885 chromosome, complete genomeMaoC domain protein dehydratase7e-1889.4
NC_014640:4193193:419941341994134199832420Achromobacter xylosoxidans A8 chromosome, complete genomeacyl dehydratase7e-1889
NC_004193:701622:711541711541711951411Oceanobacillus iheyensis HTE831, complete genomehypothetical protein4e-1476.6
NC_008268:3162824:317829331782933178673381Rhodococcus sp. RHA1, complete genomepossible MaoC-like dehydratase5e-1476.3
NC_015172:1120000:112246711224671122892426Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMaoC domain protein dehydratase2e-1374.7
NC_016114:3008500:300859530085953009023429Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeacyl dehydratase MaoC3e-1270.5
NC_016109:3591401:361566436156643616092429Kitasatospora setae KM-6054, complete genomeputative fatty acid synthase2e-1168.2
NC_003155:5957657:595765759576575958085429Streptomyces avermitilis MA-4680, complete genomehypothetical protein3e-1167.4
NC_013929:4186840:420412842041284204556429Streptomyces scabiei 87.22 chromosome, complete genomeoxidoreductase5e-1166.6
NC_015957:639774:660152660152660589438Streptomyces violaceusniger Tu 4113 chromosome, complete genomeMaoC domain-containing protein dehydratase8e-1165.9
NC_010572:3363830:338541133854113385839429Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-1065.1
NC_003888:5042283:506231750623175062745429Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-1064.7
NC_021177:4124839:414485841448584145313456Streptomyces fulvissimus DSM 40593, complete genomeMaoC domain protein dehydratase5e-1063.2
NC_010612:103081:1326041326041336351032Mycobacterium marinum M, complete genomehypothetical protein3e-0960.5
NC_009077:1027357:103086810308681031296429Mycobacterium sp. JLS, complete genomeMaoC domain protein dehydratase4e-0960.5
NC_020133:77341:9364493644946481005Mycobacterium liflandii 128FXT, complete genomeMaoC-like dehydratase4e-0960.1
NC_008146:1016446:101644610164461016874429Mycobacterium sp. MCS, complete genomeMaoC-like dehydratase7e-0959.3
NC_008705:1022252:102225210222521022680429Mycobacterium sp. KMS, complete genomeMaoC domain protein dehydratase7e-0959.3
NC_009077:3376351:337716233771623377632471Mycobacterium sp. JLS, complete genomeMaoC domain protein dehydratase3e-0857.4
NC_008146:3401743:340336834033683403838471Mycobacterium sp. MCS, complete genomeMaoC-like dehydratase3e-0857.4
NC_008705:3430839:343165034316503432120471Mycobacterium sp. KMS, complete genomeMaoC domain protein dehydratase3e-0857.4
NC_016947:2380500:239778923977892398259471Mycobacterium intracellulare MOTT-02 chromosome, complete genomedehydratase3e-0857.4
NC_017904:1896322:191064119106411911093453Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein4e-0857
NC_009664:1569335:161381616138161614232417Kineococcus radiotolerans SRS30216, complete genomeMaoC domain protein dehydratase9e-0855.5
NC_014830:3438504:347301534730153473446432Intrasporangium calvum DSM 43043 chromosome, complete genomeMaoC like domain-containing protein3e-0753.9
NC_015573:2900906:292567429256742926102429Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeMaoC domain-containing protein dehydratase2e-0651.6
NC_016887:1093609:111781911178191118694876Nocardia cyriacigeorgica GUH-2, complete genomeputative dehydratase2e-0651.2
NC_013174:601434:610650610650611084435Jonesia denitrificans DSM 20603, complete genomeMaoC domain protein dehydratase4e-0650.4
NC_016887:511034:526243526243527106864Nocardia cyriacigeorgica GUH-2, complete genomeputative 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase4e-0650.4
NC_002945:3735141:375625637562563757128873Mycobacterium bovis AF2122/97, complete genomedehydrogenase6e-0649.7