Pre_GI: BLASTP Hits

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Query: NC_008146:2744612:2744612 Mycobacterium sp. MCS, complete genome

Start: 2744612, End: 2745238, Length: 627

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012526:1576775:158002215800221580600579Deinococcus deserti VCD115, complete genomehypothetical protein1e-1376.3
NC_005296:5238882:524120852412085241777570Rhodopseudomonas palustris CGA009, complete genomehypothetical protein1e-1066.2
NC_011004:5520771:552309555230955523664570Rhodopseudomonas palustris TIE-1, complete genomeuncharacterized peroxidase-related enzyme2e-1065.9
NC_011894:6888562:692148269214826922060579Methylobacterium nodulans ORS 2060, complete genomeuncharacterized peroxidase-related enzyme8e-0857
NC_014318:10070730:100961941009619410096766573Amycolatopsis mediterranei U32 chromosome, complete genomecarboxymuconolactone decarboxylase1e-0653.1
NC_014729:1908086:192000119200011920600600Halogeometricum borinquense DSM 11551 chromosome, complete genomealkylhydroperoxidase ahpd family core domain4e-0651.6