Pre_GI: BLASTP Hits

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Query: NC_008146:1016446:1026841 Mycobacterium sp. MCS, complete genome

Start: 1026841, End: 1027314, Length: 474

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1022252:103417110341711034545375Mycobacterium sp. KMS, complete genomeprotein tyrosine phosphatase1e-62238
NC_009077:1027357:104779410477941048297504Mycobacterium sp. JLS, complete genomeprotein tyrosine phosphatase8e-40162
NC_014814:4235477:424684842468484247381534Mycobacterium sp. Spyr1 chromosome, complete genomeprotein-tyrosine-phosphatase2e-36151
NC_009338:5052000:506808750680875068611525Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein tyrosine phosphatase3e-36150
NC_014151:813755:818069818069818656588Cellulomonas flavigena DSM 20109 chromosome, complete genomeprotein tyrosine phosphatase2e-1478.2
NC_009922:2766397:277378427737842774308525Alkaliphilus oremlandii OhILAs, complete genomeprotein tyrosine phosphatase4e-0960.5
NC_018750:5399316:539996053999605400607648Streptomyces venezuelae ATCC 10712, complete genomeputative protein-tyrosine phosphatase7e-0959.7
NC_017218:534699:536669536669537274606Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeputative low molecular weight protein-tyrosine-phosphatase2e-0858.2
NC_008618:1704462:171436917143691714905537Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein2e-0858.2
NC_009921:2565640:257035925703592571036678Frankia sp. EAN1pec, complete genomeprotein tyrosine phosphatase2e-0858.2
NC_015520:55710:557105571056177468Mahella australiensis 50-1 BON chromosome, complete genomeprotein tyrosine phosphatase2e-0857.8
NC_011593:2288993:233223423322342332839606Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,protein tyrosine phosphatase4e-0857
NC_021177:5697210:570396357039635704604642Streptomyces fulvissimus DSM 40593, complete genomeProtein tyrosine phosphatase6e-0856.6
NC_014483:4891100:489759548975954898179585Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein6e-0856.6
NC_016109:5543112:554586455458645546541678Kitasatospora setae KM-6054, complete genomeputative tyrosine phosphatase1e-0755.8
NC_013174:23421:443384433844967630Jonesia denitrificans DSM 20603, complete genomeprotein tyrosine phosphatase2e-0754.7
NC_007952:2812996:281712428171242817576453Burkholderia xenovorans LB400 chromosome 2, complete sequenceProtein tyrosine phosphatase5e-0753.5
NC_014622:5251000:525672652567265257310585Paenibacillus polymyxa SC2 chromosome, complete genomeprotein tyrosine phosphatase7e-0753.1
NC_010676:61098:704167041670868453Burkholderia phytofirmans PsJN chromosome 2, complete sequenceprotein tyrosine phosphatase8e-0752.8
NC_014924:3270547:327622932762293276669441Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeprotein tyrosine phosphatase8e-0752.8
NC_021064:2085231:210352221035222104100579Propionibacterium avidum 44067, complete genomeprotein-tyrosine-phosphatase1e-0652
NC_012815:1603916:165223616522361652802567Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein3e-0650.8
NC_012814:1599241:165251816525181653084567Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein3e-0650.8
NC_011835:733320:783445783445784011567Bifidobacterium animalis subsp. lactis AD011 chromosome, completeprotein-tyrosine-phosphatase3e-0650.8
NC_017214:299637:349724349724350290567Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeProtein tyrosine phosphatase3e-0650.8
NC_017215:1605917:165713916571391657705567Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,protein-tyrosine-phosphatase3e-0650.8
NC_017216:1603000:165216416521641652730567Bifidobacterium animalis subsp. lactis BLC1, complete genomeLow molecular weight phosphotyrosine protein phosphatase domain protein3e-0650.8
NC_017217:1607679:165780516578051658371567Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein3e-0650.8
NC_013530:3204825:323122832312283231782555Xylanimonas cellulosilytica DSM 15894, complete genomeprotein tyrosine phosphatase7e-0649.7
NC_015458:3390674:339292133929213393364444Pusillimonas sp. T7-7 chromosome, complete genomeprotein tyrosine phosphatase8e-0649.7