Pre_GI: BLASTP Hits

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Query: NC_008118:56777:96172 Yersinia pestis Nepal516 plasmid pMT, complete sequence

Start: 96172, End: 96951, Length: 780

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009378:106193:132264132264133043780Yersinia pestis Pestoides F plasmid MT, complete sequencehypothetical protein1e-141501
NC_010158:92819:109824109824110603780Yersinia pestis Angola plasmid pMT-pPCP, complete sequencehypothetical protein1e-141501
NC_004838:51013:680306803068809780Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein1e-141501
NC_005815:61148:879138791388692780Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completehypothetical protein1e-141501
NC_017319:155958:164585164585165355771Shigella flexneri 2002017 plasmid pSFxv_1, complete sequencehypothetical protein2e-71268
NC_004851:157675:165923165923166693771Shigella flexneri 2a str. 301 plasmid pCP301, complete sequencehypothetical protein2e-71268
NC_007414:56508:633376333764113777Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein5e-68257
NC_002128:35000:407624076241538777Escherichia coli O157:H7 str. Sakai plasmid pO157, completehypothetical protein5e-68257