Pre_GI: BLASTP Hits

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Query: NC_008060:1346581:1357183 Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence

Start: 1357183, End: 1357941, Length: 759

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (AU 1054) was isolated from the blood of a patient with CF. This microbe has three chromosomes. Opportunistic pathogen. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008544:818730:826049826049826807759Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceGntR domain protein3e-130464
NC_015594:332432:349319349319350053735Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeGntR domain-containing protein3e-1995.5
NC_016935:3819500:382680038268003827531732Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator3e-1685.5
NC_015690:3269000:327636032763603277091732Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator4e-1685.1
NC_014479:2505823:252667125266712527399729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeGntR family transcriptional regulator9e-1684
NC_013416:1429881:143955414395541440309756Aggregatibacter actinomycetemcomitans D11S-1, complete genomeD-mannonate oxidoreductase2e-1376.3
NC_016513:1761830:177384217738421774597756Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeD-mannonate oxidoreductase2e-1376.3
NC_005810:1413305:143504514350451435806762Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulatory protein7e-1167.8
NC_010465:3046904:306868030686803069423744Yersinia pseudotuberculosis YPIII, complete genomeGntR domain protein7e-1167.8
NC_008149:3022970:304472130447213045464744Yersinia pestis Nepal516, complete genometranscriptional regulatory protein7e-1167.8
NC_009708:3035798:305763230576323058375744Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeuxu operon transcriptional regulator7e-1167.8
NC_017160:1299733:132130713213071322050744Yersinia pestis D182038 chromosome, complete genometranscriptional regulator7e-1167.8
NC_004088:3186954:320871332087133209513801Yersinia pestis KIM, complete genomeregulator for uxu operon6e-1167.8
NC_017265:2807302:282906228290622829862801Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,DNA-binding transcriptional repressor6e-1167.8
NC_014966:1668822:169026116902611691052792Vibrio vulnificus MO6-24/O chromosome II, complete sequencetranscriptional regulator1e-1067.4
NC_007974:2097334:213197321319732132776804Ralstonia metallidurans CH34 chromosome 2, complete sequenceregulatory protein GntR, HTH1e-1067.4
NC_008321:458811:474586474586475338753Shewanella sp. MR-4, complete genomeregulatory protein GntR, HTH3e-1065.5
NC_009665:4675289:468162246816224682374753Shewanella baltica OS185 chromosome, complete genometranscriptional regulator PdhR3e-1065.5
NC_011663:4579777:458252545825254583277753Shewanella baltica OS223 chromosome, complete genometranscriptional regulator PdhR3e-1065.5
NC_015733:3736104:378283237828323783611780Pseudomonas putida S16 chromosome, complete genomeDNA-binding transcriptional regulator GlcC3e-1065.5
NC_010676:2720068:273288227328822733655774Burkholderia phytofirmans PsJN chromosome 2, complete sequenceGntR domain protein3e-1065.5
NC_008253:4817864:485861648586164859389774Escherichia coli 536, complete genomeuxu operon transcriptional regulator3e-1065.5
NC_007946:4875997:491812649181264918899774Escherichia coli UTI89, complete genomeUxuR uxu operon transcriptional regulator4e-1065.1
NC_015733:3595882:361682836168283617592765Pseudomonas putida S16 chromosome, complete genomeDNA-binding transcriptional regulator GlcC7e-1064.7
NC_007275:1:149981499815699702Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completetranscriptional regulator, GntR family6e-1064.7
NC_013501:1337489:134428613442861345053768Rhodothermus marinus DSM 4252, complete genomeGntR domain protein5e-1064.7
NC_010337:2339056:234209423420942342804711Heliobacterium modesticaldum Ice1, complete genometranscriptional regulator, GntR family7e-1064.3
NC_014323:4619344:464992446499244650634711Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein8e-1064.3
NC_011745:5114500:513677251367725137545774Escherichia coli ED1a chromosome, complete genomeDNA-binding transcriptional repressor UxuR9e-1063.9
NC_007613:4403070:442852244285224429295774Shigella boydii Sb227, complete genomeregulator for uxu operon9e-1063.9
NC_015761:4355335:437435443743544375127774Salmonella bongori NCTC 12419, complete genomeuxu operon transcriptional regulator9e-1063.9
CP002185:4791811:481706548170654817790726Escherichia coli W, complete genomeDNA-binding transcriptional repressor1e-0963.5
NC_012912:844339:850632850632851399768Dickeya zeae Ech1591, complete genomeGntR domain protein2e-0963.2
NC_017328:3088907:315387331538733154643771Shigella flexneri 2002017 chromosome, complete genomeTranscriptional activator for glc operon2e-0963.2
NC_006905:4638707:466873046687304669503774Salmonella enterica subsp. enterica serovar Choleraesuis strtranscriptional repressor for uxu operon2e-0963.2
NC_004631:4687270:470799047079904708763774Salmonella enterica subsp. enterica serovar Typhi Ty2, completeuxu operon transcriptional regulator3e-0962.4
NC_013173:2261396:226881722688172269518702Desulfomicrobium baculatum DSM 4028, complete genomeGntR domain protein3e-0962.4
NC_011147:4460726:449757144975714498344774Salmonella enterica subsp. enterica serovar Paratyphi A strDNA-binding transcriptional repressor UxuR3e-0962.4
NC_010102:4745949:476664047666404767365726Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0962.4
NC_012125:4716000:474604547460454746818774Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA-binding transcriptional repressor UxuR3e-0962.4
NC_013716:5020204:504139450413945042170777Citrobacter rodentium ICC168, complete genomeexu regulon transcriptional regulator4e-0962
NC_016612:361417:361417361417362190774Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGntR family transcriptional regulator protein5e-0961.6
NC_004337:3590323:375165237516523752428777Shigella flexneri 2a str. 301, complete genometranscriptional regulator5e-0961.6
NC_012759:3648500:366540336654033666179777Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional repressor LldR5e-0961.6
NC_013526:105195:119507119507120259753Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeGntR domain protein5e-0961.6
NC_016048:3667890:367938436793843680112729Oscillibacter valericigenes Sjm18-20, complete genomeputative GntR family transcriptional regulator5e-0961.6
NC_009381:2731965:275373427537342754414681Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulatory protein8e-0960.8
NC_014306:2518996:252033425203342521041708Erwinia billingiae Eb661, complete genomeTranscriptional regulator, GntR family1e-0860.5
NC_021171:4549673:455230045523004552956657Bacillus sp. 1NLA3E, complete genomeGntR family transcriptional regulator1e-0860.5
NC_007606:3755155:377484737748473775623777Shigella dysenteriae Sd197, complete genometranscriptional regulator1e-0860.1
NC_011898:1558208:156763615676361568325690Clostridium cellulolyticum H10, complete genomeGntR domain protein2e-0859.7
NC_011894:4013830:4040962404096240423561395Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family with aminotransferase domain protein3e-0858.9
NC_011832:913994:952978952978953670693Candidatus Methanosphaerula palustris E1-9c, complete genomeGntR domain protein3e-0858.9
NC_003305:1743939:177186217718621772575714Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, GntR family3e-0858.9
NC_008148:583030:583030583030583788759Rubrobacter xylanophilus DSM 9941, complete genomeGntR-like protein3e-0858.9
NC_008027:775896:799660799660800427768Pseudomonas entomophila L48, complete genometranscriptional regulator, GntR family5e-0858.2
NC_003305:1297785:131267613126761313407732Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, GntR family8e-0857.4
NC_003063:757999:761406761406762080675Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein9e-0857.4
NC_017195:517344:536111536111536803693Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, GntR family1e-0757
NC_016604:3137694:313854031385403139238699Mycobacterium rhodesiae NBB3 chromosome, complete genometranscriptional regulator1e-0757
NC_008596:4196194:420135942013594202099741Mycobacterium smegmatis str. MC2 155, complete genomeGntR-family protein transcriptional regulator1e-0757
NC_012880:1091486:111621711162171116951735Dickeya dadantii Ech703, complete genomeGntR domain protein1e-0757
NC_017095:119361:147716147716148471756Fervidobacterium pennivorans DSM 9078 chromosome, complete genometranscriptional regulator1e-0757
NC_015687:2632557:265543326554332656128696Clostridium acetobutylicum DSM 1731 chromosome, complete genomeFadR family transcriptional regulator1e-0756.6
NC_006512:1942000:195541819554181956128711Idiomarina loihiensis L2TR, complete genomefatty acid metabolism regulator2e-0756.2
NC_011894:5056901:509465850946585095257600Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family3e-0755.8
NC_007519:1244198:125890712589071259602696Desulfovibrio alaskensis G20 chromosome, complete genomeGntR family transcriptional regulator3e-0755.8
NC_014500:2525880:254282125428212543540720Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional dual regulator of fatty acid metabolism4e-0755.5
NC_015555:1989463:200663720066372007359723Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetranscriptional regulator, GntR family with UTRA sensor domain4e-0755.5
NC_016582:9664000:967760596776059678303699Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator5e-0755.1
NC_004193:375416:394239394239394949711Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator5e-0755.1
NC_012912:2285778:228577822857782286497720Dickeya zeae Ech1591, complete genomefatty acid metabolism transcriptional regulator FadR5e-0755.1
NC_015064:1355065:137103413710341371891858Acidobacterium sp. MP5ACTX9 chromosome, complete genomeGntR domain protein6e-0754.7
NC_007953:811500:823033823033823689657Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, GntR family5e-0754.7
NC_007974:2097334:213104121310412131952912Ralstonia metallidurans CH34 chromosome 2, complete sequenceregulatory protein GntR, HTH1e-0653.5
NC_019970:2263427:227858222785822279304723Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional regulator2e-0653.1
NC_015376:1185000:118696811869681187711744Burkholderia gladioli BSR3 chromosome chromosome 2, completeGntR-like protein2e-0653.1
NC_011365:1865687:188920618892061889964759Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_015145:3236445:327180532718053272530726Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometranscriptional regulator2e-0652.8
NC_014532:2989185:299424429942442994999756Halomonas elongata DSM 2581, complete genomeGntR domain protein3e-0652.4
NC_016023:755237:755237755237755947711Bacillus coagulans 36D1 chromosome, complete genomeGntR domain-containing protein3e-0652.4
NC_010498:1094000:111323411132341113923690Escherichia coli SMS-3-5, complete genomegalactonate operon transcriptional repressor3e-0652.4
NC_004337:3590323:387759638775963878285690Shigella flexneri 2a str. 301, complete genomeregulator protein for dgo operon3e-0652.4
NC_007963:2777066:277978327797832780505723Chromohalobacter salexigens DSM 3043, complete genomeGntR-like protein4e-0652
NC_010694:891967:909868909868910632765Erwinia tasmaniensis, complete genomePyruvate dehydrogenase complex repressor6e-0651.6
NC_015434:3581001:358911635891163589820705Verrucosispora maris AB-18-032 chromosome, complete genomeGntR family transcriptional regulator5e-0651.6
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH5e-0651.6
NC_007929:1290568:129384012938401294538699Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, GntR family5e-0651.6
NC_010125:1011430:101791310179131018671759Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator protein, GntR family5e-0651.6
NC_021171:2019755:202131920213192022035717Bacillus sp. 1NLA3E, complete genometranscriptional regulator6e-0651.2
NC_015161:162000:1759481759481773361389Deinococcus proteolyticus MRP chromosome, complete genometranscriptional regulator, GntR family with aminotransferase domain7e-0651.2
NC_008497:556365:574068574068574769702Lactobacillus brevis ATCC 367, complete genomeTranscriptional regulator8e-0650.8
NC_007974:2097334:215043921504392151161723Ralstonia metallidurans CH34 chromosome 2, complete sequenceGntR-like protein8e-0650.8
NC_015172:1471501:147493214749321475636705Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeregulatory protein GntR HTH9e-0650.8
NC_021177:4221309:423668742366874237553867Streptomyces fulvissimus DSM 40593, complete genomeGntR-family transcriptional regulator9e-0650.8
NC_007712:433500:437760437760438524765Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator1e-0550.8