Pre_GI: BLASTP Hits

Some Help

Query: NC_008044:1401814:1414830 Silicibacter sp. TM1040, complete genome

Start: 1414830, End: 1415831, Length: 1002

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008686:2417000:242338424233842424307924Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein2e-31137
NC_009485:7021228:7029039702903970301871149Bradyrhizobium sp. BTAi1 chromosome, complete genomephage integrase3e-29129
NC_008043:615049:636897636897637490594Silicibacter sp. TM1040 mega plasmid, complete sequencephage integrase3e-22106
NC_014664:3003633:3019218301921830202761059Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeintegrase family protein1e-1997.8
NC_008686:2417000:242245324224532423145693Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein5e-1789
NC_016642:471656:4729034729034739491047Pseudovibrio sp. FO-BEG1 chromosome, complete genomephage integrase family4e-1685.5
NC_010511:4313769:4325412432541243264611050Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein8e-1684.7
NC_009952:997950:1007057100705710081691113Dinoroseobacter shibae DFL 12, complete genomeintegrase family protein9e-1581.3
NC_007494:714525:7351117351117362321122Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative integrase6e-1478.6
NC_007761:3047321:3051864305186430530781215Rhizobium etli CFN 42, complete genomeprobable integrase/recombinase protein1e-1274.3
NC_007964:328825:3569203569203580891170Nitrobacter hamburgensis X14, complete genomephage integrase7e-1271.6
NC_011894:6382636:6386877638687763879111035Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein1e-1170.9
NC_003317:1030220:1049498104949810505081011Brucella melitensis 16M chromosome I, complete sequenceINTEGRASE/RECOMBINASE1e-1170.5
NC_012985:1:8544854495901047Candidatus Liberibacter asiaticus str. psy62, complete genomephage-related integrase/recombinase4e-1168.9
NC_012441:956609:9566099566099576341026Brucella melitensis ATCC 23457 chromosome I, complete sequencephage-related integrase8e-1168.2
NC_017244:956554:9565549565549575791026Brucella melitensis M28 chromosome chromosome 1, complete sequencephage-related integrase8e-1168.2
NC_017248:953131:9531319531319541561026Brucella melitensis NI chromosome chromosome I, complete sequencephage integrase family site specific recombinase8e-1168.2
NC_010169:957565:9575659575659585901026Brucella suis ATCC 23445 chromosome I, complete sequencehypothetical protein8e-1168.2
NC_010742:955104:9551049551049561291026Brucella abortus S19 chromosome 1, complete sequencePhage integrase8e-1168.2
NC_004310:937800:9378009378009388251026Brucella suis 1330 chromosome I, complete sequencesite-specific recombinase, phage integrase family8e-1168.2
NC_010103:936250:9362509362509372751026Brucella canis ATCC 23365 chromosome I, complete sequencehypothetical protein8e-1168.2
NC_006932:956805:9568059568059578301026Brucella abortus biovar 1 str. 9-941 chromosome I, completesite-specific recombinase, phage integrase family8e-1168.2
NC_016778:96792:1160681160681170931026Brucella canis HSK A52141 chromosome 1, complete sequenceintegrase8e-1168.2
NC_016795:1441024:1460297146029714613221026Brucella abortus A13334 chromosome 1, complete sequenceintegrase8e-1168.2
NC_016797:937753:9377539377539387781026Brucella suis VBI22 chromosome I, complete sequencephage integrase family site specific recombinase8e-1168.2
NC_017251:937786:9377869377869388111026Brucella suis 1330 chromosome I, complete genomephage integrase family site specific recombinase8e-1168.2
NC_013119:942079:9420799420799431041026Brucella microti CCM 4915 chromosome 1, complete sequencesite-specific recombinase, phage integrase family2e-1066.6
NC_015259:485015:5473145473145485251212Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein3e-1066.2
NC_009428:833701:8478178478178489051089Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomephage integrase family protein3e-0963.2
NC_010511:915313:9227029227029238591158Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-0860.8
NC_015593:2553500:2557151255715125582871137Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein5e-0858.9
NC_008043:615049:6341046341046353391236Silicibacter sp. TM1040 mega plasmid, complete sequencephage integrase9e-0858.2
NC_011757:5048714:5048714504871450499311218Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein1e-0757.8
NC_009049:627000:6368326368326380011170Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencephage integrase family protein3e-0756.6
NC_017246:956868:956868956868957779912Brucella melitensis M5-90 chromosome chromosome I, completephage-related integrase4e-0755.8
NC_009952:366959:3847653847653859581194Dinoroseobacter shibae DFL 12, complete genomephage integrase family protein5e-0755.5
NC_007712:1516589:1520735152073515218021068Sodalis glossinidius str. 'morsitans', complete genomephage integrase6e-0755.5
NC_013941:975353:9807899807899818591071Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family1e-0654.3
NC_012967:786534:7879527879527890221071Escherichia coli B str. REL606 chromosome, complete genomeintegrase1e-0654.3
NC_011601:717072:7208917208917219611071Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase2e-0653.5
NC_011601:1039500:1043517104351710445901074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase2e-0653.1
NC_007575:1694877:1714292171429217153981107Sulfurimonas denitrificans DSM 1251, complete genomePhage integrase4e-0652.8
NC_014623:1074299:1120983112098311221911209Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein7e-0652
NC_014923:2439197:2444746244474624459361191Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeintegrase family protein7e-0651.6
NC_019973:2417000:2421910242191024231001191Mesorhizobium australicum WSM2073, complete genomesite-specific recombinase XerC7e-0651.6
NC_015675:2567000:2571899257189925730891191Mesorhizobium opportunistum WSM2075 chromosome, complete genomeintegrase family protein7e-0651.6
NC_013364:2898964:2916736291673629178061071Escherichia coli O111:H- str. 11128, complete genomeputative integrase8e-0651.6