Pre_GI: BLASTP Hits

Some Help

Query: NC_008044:136844:163129 Silicibacter sp. TM1040, complete genome

Start: 163129, End: 165096, Length: 1968

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018643:641360:6480496480496503132265Alpha proteobacterium HIMB5 chromosome, complete genometransglycosylase family protein2e-77290
NC_015684:2369651:2371278237127823734672190Oligotropha carboxidovorans OM5 chromosome, complete genomelytic transglycosylase8e-69262
NC_015580:3252534:3252534325253432545011968Novosphingobium sp. PP1Y, complete genomelytic transglycosylase catalytic subunit subunit2e-50201
NC_014618:4010689:4010689401068940126261938Enterobacter cloacae SCF1 chromosome, complete genomelytic transglycosylase4e-20100
NC_014623:4535544:4553368455336845557882421Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransglycosylase slt domain-containing protein8e-2099.4
NC_007951:4608560:4634624463462446365911968Burkholderia xenovorans LB400 chromosome 1, complete sequenceTransglycosylase3e-1997.4
NC_012779:610509:6105096105096124371929Edwardsiella ictaluri 93-146, complete genomesoluble lytic murein transglycosylase1e-1689
NC_010611:3413333:3433379343337934353221944Acinetobacter baumannii ACICU, complete genomesoluble lytic murein transglycosylase, related regulatory protein2e-1688.2
NC_020181:5384015:5384015538401553866362622Enterobacter aerogenes EA1509E, complete genomeLytic transglycosylase, catalytic3e-1687.4
NC_018145:147759:1590441590441609841941Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completelytic transglycosylase2e-1584.3
NC_009832:4269804:4292220429222042949162697Serratia proteamaculans 568, complete genomeLytic transglycosylase catalytic2e-1481.3
NC_006526:1202000:1207593120759312086451053Zymomonas mobilis subsp. mobilis ZM4, complete genomelytic murein transglycosylase1e-1378.6
NC_012914:1824955:182495518249551825521567Paenibacillus sp. JDR-2, complete genomeLytic transglycosylase catalytic1e-1378.6
NC_009012:3224000:323867632386763239362687Clostridium thermocellum ATCC 27405, complete genomeLytic transglycosylase, catalytic3e-1377.4
NC_015913:293980:294595294595295146552Candidatus Arthromitus sp. SFB-mouse-Japan, complete genometransglycosylase5e-1376.6
NC_010718:1959517:198001019800101980597588Natranaerobius thermophilus JW/NM-WN-LF, complete genomeLytic transglycosylase catalytic7e-1376.3
NC_016627:793583:793583793583794260678Clostridium clariflavum DSM 19732 chromosome, complete genomelytic murein transglycosylase3e-1273.9
NC_010730:180000:1931691931691948391671Sulfurihydrogenibium sp. YO3AOP1, complete genomeLytic transglycosylase catalytic3e-1273.9
NC_014219:1736000:175182117518211752510690Bacillus selenitireducens MLS10 chromosome, complete genomeLytic transglycosylase catalytic5e-1273.6
NC_016012:236012:256637256637257188552Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeSlt family transglycosylase7e-1272.8
NC_014972:137184:158025158025158633609Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic8e-1272.8
NC_021182:2059143:208183620818362082390555Clostridium pasteurianum BC1, complete genomesoluble lytic murein transglycosylase-like protein1e-1172
NC_003366:2266757:228197822819782282523546Clostridium perfringens str. 13, complete genomehypothetical protein2e-1171.6
NC_008261:2481500:249581124958112496356546Clostridium perfringens ATCC 13124, complete genometransglycosylase, SLT family2e-1171.6
NC_008262:2150944:216507121650712165616546Clostridium perfringens SM101, complete genomesecreted protein3e-1170.9
NC_014972:544146:547516547516548247732Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic4e-1170.5
NC_015064:2341152:2361716236171623640612346Acidobacterium sp. MP5ACTX9 chromosome, complete genomeLytic transglycosylase catalytic5e-1170.1
NC_014330:2268773:228178822817882282501714Brachyspira pilosicoli 95/1000 chromosome, complete genomelytic transglycosylase6e-1066.6
NC_019908:982471:989710989710990426717Brachyspira pilosicoli P43/6/78 chromosome, complete genomelytic transglycosylase6e-1066.6
NC_009092:4337617:435105243510524351783732Shewanella loihica PV-4, complete genomeLytic transglycosylase, catalytic1e-0965.9
NC_014220:1858747:187483218748321875473642Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeLytic transglycosylase catalytic4e-0963.9
NC_013523:959625:9807889807889830282241Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeLytic transglycosylase catalytic4e-0963.5
NC_012225:787737:794109794109794822714Brachyspira hyodysenteriae WA1, complete genomelytic transglycosylase5e-0963.5
NC_018607:1803500:180877418087741809490717Brachyspira pilosicoli B2904 chromosome, complete genomelytic transglycosylase5e-0963.2
NC_018604:1045774:105879510587951059511717Brachyspira pilosicoli WesB complete genomelytic transglycosylase1e-0862.4
NC_013891:640784:657261657261657935675Listeria seeligeri serovar 1/2b str. SLCC3954, complete genometransglycosylase, SLT family1e-0862.4
NC_007760:4055860:409261540926154093244630Anaeromyxobacter dehalogenans 2CP-C, complete genomeLytic transglycosylase, catalytic1e-0862.4
NC_006156:271410:2692702692702714172148Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein1e-0862.4
NC_009633:2137999:2137999213799921397591761Alkaliphilus metalliredigens QYMF chromosome, complete genomelytic transglycosylase catalytic subunit1e-0862
NC_016027:2387832:2396801239680123984741674Gluconacetobacter xylinus NBRC 3288, complete genomelytic murein transglycosylase2e-0861.6
NC_014150:446359:453240453240453983744Brachyspira murdochii DSM 12563 chromosome, complete genomeLytic transglycosylase catalytic2e-0861.6
NC_000964:2146000:2248350224835022552076858Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0861.2
NC_011891:4104000:412519141251914125820630Anaeromyxobacter dehalogenans 2CP-1, complete genomeLytic transglycosylase catalytic2e-0861.2
NC_015711:5479879:550380255038025504542741Myxococcus fulvus HW-1 chromosome, complete genometransglycosylase SLT domain-containing protein3e-0860.8
NC_007760:3735749:374974437497443750202459Anaeromyxobacter dehalogenans 2CP-C, complete genomeLytic transglycosylase, catalytic4e-0860.5
NC_014376:3671441:368650836865083687230723Clostridium saccharolyticum WM1 chromosome, complete genomeLytic transglycosylase catalytic4e-0860.5
NC_017243:1229597:124215712421571242882726Brachyspira intermedia PWS/A chromosome, complete genomelytic transglycosylase4e-0860.5
NC_014330:139175:1556691556691579032235Brachyspira pilosicoli 95/1000 chromosome, complete genomelytic transglycosylase catalytic domain-containing protein5e-0860.1
NC_019908:499929:4999294999295021632235Brachyspira pilosicoli P43/6/78 chromosome, complete genomelytic transglycosylase catalytic domain-containing protein5e-0860.1
NC_020126:4430142:445184144518414452590750Myxococcus stipitatus DSM 14675, complete genometransglycosylase SLT domain-containing protein5e-0860.1
NC_010814:2217153:224462722446272245265639Geobacter lovleyi SZ, complete genomeLytic transglycosylase catalytic7e-0859.7
NC_015572:1421782:143602314360231436871849Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit9e-0859.3
NC_011728:269853:2698532698532720062154Borrelia burgdorferi ZS7, complete genometransglycosylase9e-0859.3
NC_001318:270488:2704882704882727012214Borrelia burgdorferi B31, complete genomehypothetical protein9e-0859.3
NC_015425:2277570:229041522904152291074660Clostridium botulinum BKT015925 chromosome, complete genomelytic murein transglycosylase2e-0758.5
NC_014623:6150028:618544061854406186174735Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransglycosylase slt domain-containing protein1e-0758.5
NC_017179:1197763:119776311977631198317555Clostridium difficile BI1, complete genometransglycosylase2e-0757.8
NC_013315:1187986:118798611879861188540555Clostridium difficile CD196 chromosome, complete genometransglycosylase2e-0757.8
NC_009089:1329826:132982613298261330380555Clostridium difficile 630, complete genomeputative transglycosylase2e-0757.8
NC_002937:1578213:1603093160309316042291137Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetransglycosylase, SLT family3e-0757.8
NC_008555:696217:712724712724713407684Listeria welshimeri serovar 6b str. SLCC5334, complete genometransglycosylase, SLT family3e-0757.4
NC_009053:1942973:1975864197586419769611098Actinobacillus pleuropneumoniae L20, complete genomeMembrane-bound lytic murein transglycosylase C precursor5e-0757
NC_010939:1986263:2000747200074720018441098Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeMembrane-bound lytic murein transglycosylase C precursor5e-0757
NC_010278:1918000:1937451193745119385481098Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,murein transglycosylase C5e-0757
NC_013173:1356526:137746913774691377996528Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic5e-0757
NC_013194:963735:997671997671998336666Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeLytic transglycosylase catalytic5e-0757
NC_009675:4281249:429915642991564299785630Anaeromyxobacter sp. Fw109-5 chromosome, complete genomelytic transglycosylase catalytic subunit5e-0756.6
NC_013093:2599591:259959125995912600574984Actinosynnema mirum DSM 43827, complete genomeLytic transglycosylase catalytic8e-0756.2
NC_009664:533021:5479845479845490901107Kineococcus radiotolerans SRS30216, complete genomeLytic transglycosylase catalytic1e-0655.8
NC_009483:5113729:512062851206285121383756Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase1e-0655.5
NC_014311:1888686:189788118978811898510630Ralstonia solanacearum PSI07 chromosome, complete genometransglycosylase1e-0655.5
NC_009483:2854500:287564628756462876242597Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase2e-0655.1
NC_011660:1889504:189604518960451896713669Listeria monocytogenes HCC23 chromosome, complete genometransglycosylase2e-0654.7
NC_011772:1575674:159336415933641594149786Bacillus cereus G9842, complete genometransglycosylase, SLT family2e-0654.7
NC_007644:1638083:164380416438041644424621Moorella thermoacetica ATCC 39073, complete genomeLytic transglycosylase, catalytic5e-0653.5