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Query: NC_008043:167108:171207 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 171207, End: 172082, Length: 876

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002678:6061448:607659160765916077493903Mesorhizobium loti MAFF303099, complete genometranscriptional regulator4e-1272
NC_019940:3660754:368351836835183684384867Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator5e-1272
NC_015690:4469775:454605745460574546920864Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLysR family transcriptional regulator3e-1066.2
NC_016935:4233223:430236243023624303225864Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator3e-1065.9
NC_003047:74986:932879328794138852Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN4e-0962.4
NC_020411:1232962:125176712517671252690924Hydrogenobaculum sp. HO, complete genometranscriptional regulator, LysR family2e-0859.7
NC_015587:1232642:125144212514421252365924Hydrogenobaculum sp. SHO chromosome, complete genometranscriptional regulator, LysR family2e-0859.7
NC_015557:1232772:125157212515721252495924Hydrogenobaculum sp. 3684 chromosome, complete genometranscriptional regulator, LysR family2e-0859.7
NC_011126:1241655:126042712604271261350924Hydrogenobaculum sp. Y04AAS1, complete genometranscriptional regulator, LysR family3e-0859.3
NC_005810:3493607:351208835120883512969882Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator HdfR2e-0653.1