Pre_GI: BLASTN Hits

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Query: NC_008011:860000 Lawsonia intracellularis PHE/MN1-00, complete genome

Start: 860000, End: 882254, Length: 22255

Host Lineage: Lawsonia intracellularis; Lawsonia; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Lawsonia intracellularis PHE/MN1-00 was isolated from intestinal mucosal lesions in pigs that had proliferative enteropathy (PE). When introduced into health pigs, this organism produced the clinical and histological signs of PE. Causative agent for proliferative enteropathy in swine. This organism causes proliferative enteropathy (ileitis) in swine and other domesticated animals resulting in severe losses each year. This obligate intracellular pathogen infects the mucosa of the lower intestinal tract by initially infecting crypt cells, which are precursors that normally grow and divide in order to replace the epithelial cells. Once infection occurs, the crypt cells are stimulated to grow and divide abnormally, resulting in the proliferative phenotype. In severe cases of the disease the entire bowel can become affected and persist for up to 40 days, greatly affecting the host animal.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003317:1263562*1263562128225718696Brucella melitensis 16M chromosome I, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_008751:1736512*1736512175726720756Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008530:1551356*1551356158801736662Lactobacillus gasseri ATCC 33323, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_005362:1651767*1651767169076238996Lactobacillus johnsonii NCC 533, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002937:1706000*1706000172723921240Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete1e-1179.8BLASTN svgBLASTP svg
NC_006814:403723*40372344563241910Lactobacillus acidophilus NCFM, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010080:445398*44539846977024373Lactobacillus helveticus DPC 4571, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014106:419511*41951145680837298Lactobacillus crispatus ST1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014724:439594*43959448564446051Lactobacillus amylovorus GRL 1112 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015214:437733*43773348259944867Lactobacillus acidophilus 30SC chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015602:117939*11793915324635308Lactobacillus kefiranofaciens ZW3 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018528:446610*44661047359926990Lactobacillus helveticus R0052 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007929:210088*21008823862428537Lactobacillus salivarius subsp. salivarius UCC118, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007929:473500*47350049963926140Lactobacillus salivarius subsp. salivarius UCC118, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015975:1493636*1493636151659922964Lactobacillus ruminis ATCC 27782 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015975:267994*26799428810120108Lactobacillus ruminis ATCC 27782 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_019968:1084288*1084288113090746620Prevotella dentalis DSM 3688 chromosome 2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_014727:2010000*2010000203212022121Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_014727:853500*85350087209918600Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_015978:996933*996933102184824916Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_019673:1420198*1420198144786527668Saccharothrix espanaensis DSM 44229 complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014363:1902868*1902868192872325856Olsenella uli DSM 7084 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009089:117980*11798016311645137Clostridium difficile 630, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009089:1*13459934599Clostridium difficile 630, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008526:817628*81762883659918972Lactobacillus casei ATCC 334, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008525:664500*66450068827523776Pediococcus pentosaceus ATCC 25745, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008497:1111891*1111891114836436474Lactobacillus brevis ATCC 367, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007576:435713*43571345815822446Lactobacillus sakei subsp. sakei 23K, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007576:1747662*1747662177048822827Lactobacillus sakei subsp. sakei 23K, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009513:618000*61800064445826459Lactobacillus reuteri F275, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010999:880878*88087890041319536Lactobacillus casei, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013198:813830*81383083545121622Lactobacillus rhamnosus GG, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013199:811929*81192983409922171Lactobacillus rhamnosus Lc 705, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013316:1*14895548955Clostridium difficile R20291, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014334:769205*76920579363824434Lactobacillus casei str. Zhang chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015428:700479*70047972176721289Lactobacillus buchneri NRRL B-30929 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015697:1814128*1814128185559941472Lactobacillus reuteri SD2112 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014614:2500301*2500301252659926299Clostridium sticklandii, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014614:554949*55494957879923851Clostridium sticklandii, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007413:1405817*1405817142811722301Anabaena variabilis ATCC 29413, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011899:948790*94879096756618777Halothermothrix orenii H 168, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_019978:7535*75353211824584Halobacteroides halobius DSM 5150, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014751:225477*22547724539519919Mycoplasma leachii PG50 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012526:157000*15700017910522106Deinococcus deserti VCD115, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005364:17709117709119836621276Mycoplasma mycoides subsp. mycoides SC str. PG1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008751:17625621762562178759925038Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018870:427357*42735744729619940Thermacetogenium phaeum DSM 12270 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018664:3009166*3009166304846639301Clostridium acidurici 9a chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg