Pre_GI: BLASTP Hits

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Query: NC_007963:1190847:1244671 Chromohalobacter salexigens DSM 3043, complete genome

Start: 1244671, End: 1245285, Length: 615

Host Lineage: Chromohalobacter salexigens; Chromohalobacter; Halomonadaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Chromohalobacter salexigens DSM 3043 was first isolated from a solar salt facility on Bonaire Island, Netherlands Antilles. A moderate halophile which can grow on a variety of salts. This bacterium is a moderate halophile, yet does not require high concentrations of sodium chloride. The salt requirements of this organism can be met by ions of other salts, such as potassium, rubidium, ammonium, bromide. Several plasmids have been isolated from this organism. Plasmid pMH1 contains genes for resistance to kanamycin, neomycin, and tetracycline. A smaller plasmid, pHE1, which does not code for antibiotic resistance genes, has also been isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014532:1307983:133179013317901332392603Halomonas elongata DSM 2581, complete genomeK03088 RNA polymerase sigma-70 factor, ECF subfamily2e-62238
NC_009050:604950:619640619640620254615Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-25115
NC_010678:642769:664204664204664836633Ralstonia pickettii 12J chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily6e-25114
NC_007509:71954:736517365174262612Burkholderia sp. 383 chromosome 3, complete sequencesigma-24 (FecI-like)7e-25113
NC_012660:3689223:370480737048073705265459Pseudomonas fluorescens SBW25 chromosome, complete genomeputative RNA polymerase sigma factor4e-24111
NC_013446:2237854:225325022532502253825576Comamonas testosteroni CNB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-24111
NC_017047:1434500:145073114507311451312582Rahnella aquatilis HX2 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit7e-24110
NC_015061:1481500:149778814977881498369582Rahnella sp. Y9602 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-24110
NC_014931:1642179:165110916511091651702594Variovorax paradoxus EPS chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-23109
NC_014311:1106871:112273411227341123375642Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor, sigma-242e-22105
NC_014931:1044313:106127810612781061889612Variovorax paradoxus EPS chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-22104
NC_016906:1458158:147173414717341472315582Gordonia polyisoprenivorans VH2 chromosome, complete genomesigma-70 family RNA polymerase sigma factor7e-21100
NC_015563:3401867:340751334075133408091579Delftia sp. Cs1-4 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor3e-1994.7
NC_010002:4175809:418865341886534189231579Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1994.7
NC_017986:5467279:548737254873725487980609Pseudomonas putida ND6 chromosome, complete genomeRNA polymerase sigma factor9e-1993.6
NC_014355:3669470:367093436709343671530597Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma factor SigK (Sigma-K)4e-1787.8
NC_017273:352150:380081380081380596516Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completeECF subfamily RNA polymerase sigma-24 subunit3e-1685.1
NC_015703:5272193:529904352990435299582540Runella slithyformis DSM 19594 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-1581.6
NC_013037:5395951:539916253991625399872711Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1375.1
NC_009952:3596399:360359636035963604171576Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor2e-1272.4
NC_011886:1891077:190513119051311905970840Arthrobacter chlorophenolicus A6, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1271.2
NC_009925:1184442:118898911889891189603615Acaryochloris marina MBIC11017, complete genomeRNA polymerase sigma-24 subunit2e-1169.3
NC_008700:2451798:247336124733612474008648Shewanella amazonensis SB2B, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.5
NC_011961:304158:307073307073307639567Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily4e-1064.7
NC_013093:2230171:223517522351752235852678Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1064.3
NC_017080:1194199:119784911978491198454606Phycisphaera mikurensis NBRC 102666, complete genomeRNA polymerase ECF-type sigma factor1e-0963.2
NC_019673:3041936:304282330428233043461639Saccharothrix espanaensis DSM 44229 complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.4
NC_009092:1684467:170170617017061702344639Shewanella loihica PV-4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0961.6
NC_016631:3917253:393719939371993937939741Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit6e-0960.8
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0858.5
NC_015589:3241364:324630432463043246867564Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0756.2
NC_004459:1794540:181002018100201810580561Vibrio vulnificus CMCP6 chromosome I, complete sequenceRNA polymerase sigma-70 factor5e-0754.3
NC_009142:6199326:620408662040866204679594Saccharopolyspora erythraea NRRL 2338, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0753.9
NC_012659:2715651:273817827381782738756579Bacillus anthracis str. A0248, complete genomeRNA polymerase sigma factor8e-0753.5
NC_005945:2716000:273861327386132739191579Bacillus anthracis str. Sterne, complete genomeRNA polymerase sigma-70 factor8e-0753.5
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0653.1
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor3e-0652
NC_003997:2715623:273815027381502738692543Bacillus anthracis str. Ames, complete genomeRNA polymerase sigma-70 factor3e-0652
NC_008536:3160540:318629731862973186758462Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.8