Pre_GI: BLASTP Hits

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Query: NC_007958:2423335:2426464 Rhodopseudomonas palustris BisB5, complete genome

Start: 2426464, End: 2427186, Length: 723

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011004:2507566:251411225141122514834723Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, LuxR family1e-117422
NC_007778:3784104:379951837995183800240723Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LuxR family2e-72272
NC_014834:2206119:223396822339682234687720Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein7e-64243
NC_010172:5036385:503965450396545040385732Methylobacterium extorquens PA1, complete genomeAutoinducer-binding domain protein1e-34146
NC_010514:6000:278042780428550747Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, completetranscriptional regulator, LuxR family1e-21103
NC_012988:5516872:552180955218095522306498Methylobacterium extorquens DM4, complete genomeN-acylhomoserine lactone LuxR family transcriptional regulator1e-20100
NC_019973:5899142:592654659265465927292747Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-1687
NC_014923:5970182:599758959975895998335747Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein1e-1687
NC_015675:6538500:655225765522576553003747Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-1687
NC_004463:1992000:203431920343192035080762Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein9e-1684
NC_015259:734795:739811739811740503693Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative N-acyl homoserine lactone transcriptional regulator, LuxR-like protein6e-1580.9
NC_019973:2744000:274754427475442748266723Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-1480.1
NC_015675:2839000:284249128424912843213723Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-1480.1
NC_014923:2672000:267549126754912676213723Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein1e-1480.1
NC_010682:460523:492274492274493035762Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, LuxR family3e-1478.6
NC_015259:485015:532878532878533531654Polymorphum gilvum SL003B-26A1 chromosome, complete genomeLuxR family transcriptional regulator2e-1376.3
NC_014834:614890:624618624618625346729Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein3e-1375.5
NC_020453:1025891:102750510275051028296792Agromonas oligotrophica S58 DNA, complete genomehypothetical protein8e-1373.9
NC_019973:5650646:568189956818995682624726Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-1273.2
NC_015675:6276357:630761063076106308335726Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-1273.2
NC_009254:329700:339382339382340164783Burkholderia vietnamiensis G4 chromosome 3, complete sequenceresponse regulator receiver protein3e-1272.4
NC_010125:2884762:293002229300222930741720Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, luxR family8e-1270.9
NC_014259:3984568:400097840009784001694717Acinetobacter sp. DR1 chromosome, complete genomeTranscriptional activator protein phzR2e-1169.7
NC_015637:325561:342547342547343269723Vibrio anguillarum 775 chromosome chromosome II, complete sequenceLuxR family transcriptional regulator2e-1169.7
NC_010410:3777076:379324937932493793965717Acinetobacter baumannii AYE, complete genomeputative Autoinducer-binding transcriptional regulator (LuxR family)4e-1168.6
NC_011586:164746:165921165921166637717Acinetobacter baumannii AB0057 chromosome, complete genomeeR transcriptional regulator4e-1168.6
NC_011595:3607402:362357536235753624291717Acinetobacter baumannii AB307-0294, complete genometranscriptional activator protein phzR4e-1168.6
NC_017171:155836:157012157012157728717Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeautoinducer-binding transcriptional regulator4e-1168.6
NC_017387:147906:149082149082149798717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeautoinducer-binding transcriptional regulator4e-1168.6
NC_003296:941920:978998978998979744747Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTIONAL ACTIVATOR OF QUORUM SENSING AUTOINDUCER SYNTHESIS TRANSCRIPTION REGULATOR PROTEIN3e-1168.6
NC_010611:154307:155484155484156200717Acinetobacter baumannii ACICU, complete genomeDNA-binding HTH domain-containing protein4e-1168.2
NC_005773:1851116:187462718746271875328702Pseudomonas syringae pv. phaseolicola 1448A, complete genomeautoinducer transcriptional regulator AhlR7e-1167.8
NC_016603:3259432:326063032606303261346717Acinetobacter calcoaceticus PHEA-2 chromosome, complete genometranscriptional activator of quorum sensing autoinducer synthesis transcription regulator protein7e-1167.8
NC_009085:131000:132302132302132898597Acinetobacter baumannii ATCC 17978, complete genomeeR transcriptional regulator6e-1167.8
NC_014923:5868000:587372958737295874466738Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein1e-1067
NC_019973:5797000:580268958026895803426738Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-1067
NC_015675:6423000:642840064284006429137738Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-1067
NC_008391:2045348:205893020589302059619690Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LuxR family1e-1066.6
NC_007802:1093785:111506011150601115791732Jannaschia sp. CCS1, complete genometranscriptional regulator, LuxR family2e-1066.2
NC_017249:8221992:822574082257408226213474Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator2e-1065.9
NC_016816:2953530:298349529834952984217723Pantoea ananatis LMG 5342, complete genometranscriptional activator protein PhzR7e-1064.3
NC_007761:3047321:304927530492753050057783Rhizobium etli CFN 42, complete genomeautoinducer transcriptional regulator protein8e-1063.9
NC_014310:845527:862340862340863056717Ralstonia solanacearum PSI07 megaplasmid, complete sequenceLuxR family transcriptional regulator8e-1063.9
NC_010515:2691000:271900327190032719722720Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LuxR family9e-1063.9
NC_020453:6821500:683645968364596837193735Agromonas oligotrophica S58 DNA, complete genometranscriptional regulator, LuxR family1e-0963.9
NC_016027:194842:203812203812204525714Gluconacetobacter xylinus NBRC 3288, complete genomeN-acylhomoserine lactone-dependent regulatory protein1e-0963.5
NC_007511:1147696:117772911777291178448720Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LuxR family2e-0962.8
NC_010995:1417329:143831214383121439028717Cellvibrio japonicus Ueda107, complete genomeputative two-component transcriptional regulator, LuxR family4e-0962
NC_009436:2685910:270101327010132701735723Enterobacter sp. 638, complete genomeDNA-binding transcriptional activator SdiA3e-0962
NC_011001:2085986:208673720867372087456720Burkholderia cenocepacia J2315 chromosome 2, complete sequenceN-acylhomoserine lactone dependent regulatory protein CepR3e-0962
NC_014837:1570500:157253015725301573252723Pantoea sp. At-9b chromosome, complete genomeLuxR family transcriptional regulator4e-0961.6
NC_012880:135508:146864146864147574711Dickeya dadantii Ech703, complete genometranscriptional regulator, LuxR family6e-0961.2
NC_015259:673662:679113679113679880768Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, LuxR family6e-0961.2
NC_010681:121647:144448144448145068621Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, LuxR family7e-0960.8
NC_014618:2139639:215415321541532154866714Enterobacter cloacae SCF1 chromosome, complete genomeLuxR family transcriptional regulator3e-0858.9
NC_011982:206784:225258225258225950693Agrobacterium vitis S4 plasmid pTiS4, complete sequencetranscriptional regulator7e-0857.8
NC_012721:2406874:241317024131702413991822Burkholderia glumae BGR1 chromosome 2, complete genomeAutoinducer-binding domain protein2e-0756.6
NC_012779:2755338:276783827678382768557720Edwardsiella ictaluri 93-146, complete genomeAHL-dependent transcriptional regulator3e-0755.8
NC_016514:2950860:295410229541022954824723Enterobacter cloacae EcWSU1 chromosome, complete genomeregulatory protein SdiA4e-0755.5
NC_014394:1594071:159742715974271598158732Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, LuxR family5e-0754.7
NC_013446:2961647:296590429659042966623720Comamonas testosteroni CNB-2, complete genometranscriptional regulator, luxR family2e-0653.1
NC_011979:2641500:265821026582102658956747Geobacter sp. FRC-32, complete genometranscriptional regulator, LuxR family2e-0652.8
NC_010557:207846:211136211136211855720Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LuxR family5e-0651.6