Pre_GI: BLASTP Hits

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Query: NC_007954:3887488:3898948 Shewanella denitrificans OS217, complete genome

Start: 3898948, End: 3899637, Length: 690

Host Lineage: Shewanella denitrificans; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from the Gotland Deep, an anoxic basin in the central Baltic Sea in 1986 from a depth of 120-130 m. Denitrifying marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella denitrificans is a vigorous denitrifier, able to convert nitrite and nitrate to nitrogen. This organism has been isolated from seawater and may play a significant role in nitrogen cycling in marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:860944:870555870555871343789Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator7e-50197
NC_010501:4379920:438793643879364388715780Pseudomonas putida W619, complete genomeputative phage repressor2e-49196
NC_009665:3869904:389559738955973896322726Shewanella baltica OS185 chromosome, complete genomeputative phage repressor6e-43174
NC_007712:1516589:153094915309491531668720Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-42171
NC_004129:2328491:234971423497142350442729Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family1e-40166
NC_011770:1431740:144568614456861446441756Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-40164
NC_004129:4368356:437957643795764380364789Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family3e-40164
NC_007712:1516589:153299615329961533706711Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-37156
NC_016830:5994494:600195060019506002681732Pseudomonas fluorescens F113 chromosome, complete genomecro ci family transcriptional regulator9e-32137
NC_009778:959982:977343977343978032690Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-30131
NC_015379:6023926:603163860316386032267630Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative regulatory protein1e-29130
NC_007712:3067000:309927530992753099997723Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator5e-30130
NC_013361:3287671:329508932950893295796708Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI9e-28123
NC_005773:5310339:531033953103395311070732Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, Cro/CI family2e-27122
NC_009999:38832:459184591846562645Shewanella baltica OS195 plasmid pS19502, complete sequenceputative phage repressor2e-23109
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)7e-1890.5
NC_020260:1615135:162344316234431623850408Cronobacter sakazakii Sp291, complete genometranscriptional repressor DicA4e-1684.7
NC_011601:1269500:127378112737811274188408Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometranscriptional repressor DicA2e-1582.8
NC_011751:1859606:188001818800181880476459Escherichia coli UMN026 chromosome, complete genometranscriptional repressor DicA4e-1581.6
NC_017506:3248724:325658932565893257266678Marinobacter adhaerens HP15 chromosome, complete genomephage repressor5e-1581.3
NC_013361:2138716:215983821598382160245408Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional repressor DicA5e-1581.3
CU928145:1408280:141408614140861414544459Escherichia coli 55989 chromosome, complete genomeputative repressor protein of division inhibition from phage origin5e-1581.3
NC_011748:1408280:141408614140861414544459Escherichia coli 55989, complete genometranscriptional repressor DicA5e-1581.3
NC_016612:3314846:332407433240743324481408Klebsiella oxytoca KCTC 1686 chromosome, complete genometranscriptional repressor DicA1e-1480.1
NC_009708:2537557:255467625546762555386711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerepressor protein C21e-1479.7
NC_013941:3300000:330265133026513303301651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP22 repressor protein c24e-1478.6
NC_013361:3112023:312984531298453130495651Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI4e-1478.6
NC_012947:3015985:302163430216343022284651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeXRE family transcriptional regulator4e-1478.6
NC_009800:289000:301440301440302090651Escherichia coli HS, complete genomeP22 repressor protein c24e-1478.6
NC_009801:2193000:221593622159362216331396Escherichia coli E24377A, complete genomeputative transcriptional regulator DicA4e-1478.2
NC_015968:3301958:331235333123533313006654Enterobacter asburiae LF7a chromosome, complete genomephage repressor like XRE family transcriptional regulator3e-1375.5
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage4e-1375.1
NC_014034:3111981:311804831180483118797750Rhodobacter capsulatus SB1003 chromosome, complete genomeXRE family transcriptional regulator4e-1375.1
NC_007946:2625461:262998526299852630635651Escherichia coli UTI89, complete genomerepressor protein6e-1374.3
NC_010814:294394:306642306642307334693Geobacter lovleyi SZ, complete genomeputative phage repressor2e-1273.2
CP002185:1770815:179273017927301793137408Escherichia coli W, complete genomeQin prophage; predicted regulator for DicB2e-1272.4
CP002516:2305659:231271923127192313126408Escherichia coli KO11, complete genomehelix-turn-helix domain protein2e-1272.4
AC_000091:1627049:164964816496481650055408Escherichia coli W3110 DNA, complete genomepredicted regulator for DicB2e-1272.4
NC_010468:2265423:226963722696372270044408Escherichia coli ATCC 8739, complete genometranscriptional regulator, XRE family2e-1272.4
NC_000913:1625500:164595816459581646365408Escherichia coli K12, complete genomeQin prophage; predicted regulator for DicB2e-1272.4
CU928160:1668842:169078616907861691193408Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator for DicB; Qin prophage2e-1272.4
NC_010473:1712984:173558317355831735990408Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted regulator for DicB2e-1272.4
NC_011741:1668842:169078616907861691193408Escherichia coli IAI1 chromosome, complete genometranscriptional repressor DicA2e-1272.4
NC_012759:1517500:153801715380171538424408Escherichia coli BW2952 chromosome, complete genometranscriptional repressor DicA2e-1272.4
NC_016902:2305659:231271923127192313126408Escherichia coli KO11FL chromosome, complete genomehelix-turn-helix domain-containing protein2e-1272.4
NC_011083:374000:385883385883386533651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,P22 repressor protein c23e-1272
NC_014972:2798670:281793528179352818681747Desulfobulbus propionicus DSM 2032 chromosome, complete genomeputative phage repressor1e-1170.1
NC_012214:1974500:198214819821481982549402Erwinia pyrifoliae Ep1/96, complete genomeHTH-type transcriptional regulator DicA2e-1168.9
CU928145:1773642:179391017939101794317408Escherichia coli 55989 chromosome, complete genomeHTH-type transcriptional regulator dicA (Repressor protein of division inhibition gene dicA) of prophage4e-1168.6
NC_011748:1773642:179391017939101794317408Escherichia coli 55989, complete genometranscriptional repressor DicA4e-1168.6
NC_014836:1052214:105720510572051057861657Desulfurispirillum indicum S5 chromosome, complete genomepeptidase S24/S26A/S26B7e-1167.4
NC_016809:389561:394152394152394811660Haemophilus influenzae 10810, complete genomehypothetical protein1e-1067
NC_007963:1552761:156075215607521561435684Chromohalobacter salexigens DSM 3043, complete genomeputative phage repressor2e-1066.2
NC_010645:406794:414160414160415113954Bordetella avium 197N, complete genomephage repressor protein2e-1066.2
NC_017986:3283433:329590632959063296607702Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1065.9
NC_008609:251608:267950267950268657708Pelobacter propionicus DSM 2379, complete genomeputative phage repressor3e-1065.5
NC_014640:4951076:4958381495838149594841104Achromobacter xylosoxidans A8 chromosome, complete genomepeptidase S24-like family protein5e-1064.7
NC_012559:1888000:189387718938771894665789Laribacter hongkongensis HLHK9, complete genomeTranscriptional regulator1e-0963.5
NC_014562:1844268:185137318513731852005633Pantoea vagans C9-1 chromosome, complete genomeLexA repressor2e-0962.8
NC_011989:2549252:255180625518062552465660Agrobacterium vitis S4 chromosome 1, complete sequencetranscriptional regulator2e-0962.8
NC_009256:1253384:126083512608351261551717Burkholderia vietnamiensis G4 chromosome 1, complete sequenceputative phage repressor3e-0962
NC_012691:779826:793864793864794634771Tolumonas auensis DSM 9187, complete genomeputative phage repressor9e-0960.5
NC_020164:1677452:170617817061781706399222Staphylococcus warneri SG1, complete genometransciptional regulator1e-0860.1
NC_017047:1906000:190737719073771908024648Rahnella aquatilis HX2 chromosome, complete genomeputative repressor protein of prophage1e-0860.1
NC_011770:2690501:270216227021622702968807Pseudomonas aeruginosa LESB58, complete genomecI repressor protein6e-0857.8
NC_009655:1357486:136895013689501369636687Actinobacillus succinogenes 130Z chromosome, complete genomeputative phage repressor6e-0857.8
NC_007645:605500:605820605820606407588Hahella chejuensis KCTC 2396, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidase)9e-0857
NC_021066:2226826:224391422439142244135222Raoultella ornithinolytica B6, complete genomeregulatory protein cro (Antirepressor)2e-0756.6
NC_016628:373815:385489385489386085597Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceprophage MuSo2, transcriptional regulator, Cro/CI family3e-0755.5
NC_013171:896802:898431898431899051621Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, XRE family4e-0755.1
NC_020272:2748733:279546227954622795836375Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein7e-0754.3
NC_019842:1172944:117596611759661176340375Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein7e-0754.3
NC_013941:3182576:319016231901623190836675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-0754.3
NC_002737:780857:780857780857781603747Streptococcus pyogenes M1 GAS, complete genomeputative repressor protein - phage associated9e-0753.9
NC_015738:629297:632870632870633292423Eggerthella sp. YY7918, complete genomehypothetical protein9e-0753.9
NC_010516:2328288:234697823469782347427450Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator8e-0753.9
NC_009348:4135002:415400441540044154720717Aeromonas salmonicida subsp. salmonicida A449, complete genomeprophage transcriptional regulator8e-0753.9
NC_015663:4522109:453774545377454538440696Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage repressor protein CI2e-0652.8
NC_010002:4508467:451639745163974517047651Delftia acidovorans SPH-1, complete genomeputative phage repressor2e-0652.8
NC_007644:280000:287262287262287648387Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family3e-0652.4
NC_002937:1578213:158843315884331589107675Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetranscriptional regulator, putative3e-0652.4
NC_007963:1370903:138272413827241383341618Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, XRE family2e-0652.4
NC_011415:2277559:230242823024282302757330Escherichia coli SE11 chromosome, complete genometranscriptional repressor DicA3e-0652
NC_009617:1897887:190150219015021901873372Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0652
NC_017033:2081206:209160520916052092288684Frateuria aurantia DSM 6220 chromosome, complete genomeputative transcriptional regulator3e-0652
NC_009348:1663870:166905016690501669733684Aeromonas salmonicida subsp. salmonicida A449, complete genomephage repressor3e-0652
NC_011206:1233985:123617212361721236630459Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, XRE family9e-0650.4
NC_007722:2954876:296208129620812962716636Erythrobacter litoralis HTCC2594, complete genomeprophage MuMc02, peptidase, family S249e-0650.4