Some Help

Query: NC_007954:334795:354155 Shewanella denitrificans OS217, complete genome

Start: 354155, End: 354451, Length: 297

Host Lineage: Shewanella denitrificans; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from the Gotland Deep, an anoxic basin in the central Baltic Sea in 1986 from a depth of 120-130 m. Denitrifying marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella denitrificans is a vigorous denitrifier, able to convert nitrite and nitrate to nitrogen. This organism has been isolated from seawater and may play a significant role in nitrogen cycling in marine environments.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012912:1053618:107040710704071070643237Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA3e-1580.5
NC_014618:690056:701162701162701398237Enterobacter cloacae SCF1 chromosome, complete genomeprophage CP4-57 regulatory2e-1477.8
NC_015761:299386:306683306683306919237Salmonella bongori NCTC 12419, complete genomeprophage DNA-binding protein1e-1375.1
NC_008322:373531:387382387382387627246Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA2e-1271.2
NC_011745:291422:300366300366300614249Escherichia coli ED1a chromosome, complete genomeputative AlpA-family regulatory protein from prophage8e-1269.3
NC_008577:4533574:454150445415044541731228Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-0652
NC_013353:1305712:132750913275091327829321Escherichia coli O103:H2 str. 12009, complete genomeDNA binding protein4e-0650.4
AP010958:1305712:132750913275091327829321Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative DNA binding protein4e-0650.4
NC_017047:1906000:190691119069111907213303Rahnella aquatilis HX2 chromosome, complete genomeDNA binding protein8e-0649.3