Pre_GI: BLASTP Hits

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Query: NC_007953:938346:941444 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 941444, End: 942472, Length: 1029

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015136:1101725:113125811312581132256999Burkholderia sp. CCGE1001 chromosome 1, complete sequenceSMP-30/gluconolaconase/LRE-like region-containing protein4e-95348
NC_009338:5161886:5180968518096851819751008Mycobacterium gilvum PYR-GCK chromosome, complete genomestrictosidine synthase4e-1169.3
NC_009832:5369566:5375366537536653771651800Serratia proteamaculans 568, complete genomeStrictosidine synthase1e-0860.8
NC_007953:1434705:143724314372431438127885Burkholderia xenovorans LB400 chromosome 3, complete sequenceputative senescence marker protein-30 (SMP-30)5e-0858.9
NC_015563:1129469:115927611592761160178903Delftia sp. Cs1-4 chromosome, complete genomeSMP-30/gluconolaconase/LRE-like region-containing protein6e-0858.5
NC_013947:4917711:493559849355984936506909Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeGluconolactonase1e-0757.8
NC_013730:3863581:3880852388085238818801029Spirosoma linguale DSM 74, complete genomeGluconolactonase2e-0757
NC_019904:334654:337464337464338357894Echinicola vietnamensis DSM 17526 chromosome, complete genomegluconolactonase3e-0756.2
NC_007492:3180480:3229601322960132307191119Pseudomonas fluorescens PfO-1, complete genomeTwin-arginine translocation pathway signal6e-0755.5
NC_009380:725870:740014740014740937924Salinispora tropica CNB-440 chromosome, complete genomegluconolactonase6e-0755.5
NC_009648:4359875:4363260436326043642761017Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative outer membrane protein; gluconolactonase9e-0754.7
NC_012731:5074000:5077439507743950784551017Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative outer membrane gluconolactonase9e-0754.7
NC_011283:105245:1182381182381192541017Klebsiella pneumoniae 342 chromosome, complete genomeSMP-30/gluconolactonase/LRE family protein1e-0654.3
NC_013850:109500:1234341234341244501017Klebsiella variicola At-22 chromosome, complete genomeGluconolactonase1e-0654.3
NC_009953:691686:713829713829714752924Salinispora arenicola CNS-205 chromosome, complete genomegluconolactonase3e-0653.1