Pre_GI: BLASTP Hits

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Query: NC_007953:938346:939666 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 939666, End: 940823, Length: 1158

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015416:2723189:2760667276066727619801314Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein3e-28126
NC_014844:1270618:1279616127961612813341719Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein7e-22105
NC_009051:2097271:2103518210351821049421425Methanoculleus marisnigri JR1, complete genomedipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein2e-21103
NC_013861:469500:4972774972774984611185Legionella longbeachae NSW150, complete genomeprolyl oligopeptidase3e-20100
NC_013757:1888850:1924046192404619252991254Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein1e-1997.8
NC_014844:1270618:1278350127835012796061257Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein1e-1481.3
NC_016048:1438721:1465190146519014663261137Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein4e-1479.3
NC_016906:1458158:1473580147358014748421263Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative dipeptidyl aminopeptidase/acylaminoacyl peptidase2e-1377
NC_020304:1097478:1097478109747810986981221Desulfocapsa sulfexigens DSM 10523, complete genomelysophospholipase4e-1375.9
NC_002944:4163490:4194956419495641960621107Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein5e-1065.9
NC_015957:5310000:5331348533134853324301083Streptomyces violaceusniger Tu 4113 chromosome, complete genomedipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein1e-0964.7
NC_004193:375416:4882514882514900471797Oceanobacillus iheyensis HTE831, complete genomeacylamino-acid-releasing enzyme7e-0652