Pre_GI: BLASTP Hits

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Query: NC_007953:572926:582809 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 582809, End: 583807, Length: 999

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008786:4216152:423616342361634237110948Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator3e-25115
NC_010172:3712000:3731947373194737337281782Methylobacterium extorquens PA1, complete genomeABC transporter related5e-21102
NC_010725:3992948:4015262401526240170431782Methylobacterium populi BJ001, complete genomeABC transporter related2e-20100
NC_012988:4075429:4097873409787340996541782Methylobacterium extorquens DM4, complete genomebranched chain amino acid ABC transporter ATPase/permease4e-2099
NC_014830:3438504:3477396347739634784031008Intrasporangium calvum DSM 43043 chromosome, complete genomeinner-membrane translocator1e-1997.8
NC_015684:1343251:1362993136299313640031011Oligotropha carboxidovorans OM5 chromosome, complete genomeABC transporter permease2e-1997.1
NC_015499:119200:1449201449201459421023Thermodesulfobium narugense DSM 14796 chromosome, complete genomeABC-type transporter, integral membrane subunit5e-1995.5
NC_020291:6426704:644486264448626445827966Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family3e-1893.2
NC_012658:545840:548918548918549862945Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter permease5e-1892
NC_009617:3184924:3216396321639632174481053Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator6e-1892
NC_015724:129331:149490149490150476987Cupriavidus necator N-1 plasmid BB2p, complete sequenceinner-membrane translocator2e-1790.5
NC_014844:2638994:2656306265630626575981293Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeinner-membrane translocator8e-1788.2
NC_007953:504939:515785515785516729945Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit1e-1687.4
NC_015458:3077804:3095936309593630969491014Pusillimonas sp. T7-7 chromosome, complete genomeputative branched-chain amino acid transport permease2e-1687
NC_010424:697187:7023527023527033591008Candidatus Desulforudis audaxviator MP104C, complete genomeinner-membrane translocator1e-1584.3
NC_010511:6169468:618855961885596189512954Methylobacterium sp. 4-46 chromosome, complete genomeinner-membrane translocator2e-1583.6
NC_015318:981989:996989996989997915927Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit3e-1583.2
NC_020210:2044944:2050274205027420512811008Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter permease3e-1582.8
NC_011979:3070110:307011030701103071072963Geobacter sp. FRC-32, complete genomeinner-membrane translocator9e-1581.3
NC_010676:2658495:2678591267859126797601170Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator2e-1480.1
NC_010572:6463939:6486413648641364882091797Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative branched-chain amino acid ABC transporter permease protein3e-1479.7
NC_014153:1663597:1675237167523716762711035Thiomonas intermedia K12 chromosome, complete genomeinner-membrane translocator6e-1478.6
NC_015953:1581542:1595003159500315968021800Streptomyces sp. SirexAA-E chromosome, complete genomeinner-membrane translocator9e-1478.2
NC_007948:360199:371010371010371945936Polaromonas sp. JS666, complete genomeinner-membrane translocator9e-1478.2
NC_017192:1063955:106606210660621067027966Arcobacter sp. L, complete genomebranched-chain amino acid ABC transporter permease component7e-1478.2
NC_011060:2099255:210653921065392107402864Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator7e-1478.2
NC_007511:719493:7333997333997346701272Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit2e-1377
NC_015376:3631392:3632854363285436339151062Burkholderia gladioli BSR3 chromosome chromosome 2, completeinner-membrane translocator2e-1376.6
NC_021066:1393750:1408936140893614102221287Raoultella ornithinolytica B6, complete genomeBranched-chain amino acid transport system permease protein LivM4e-1375.5
NC_008061:428501:4431034431034443741272Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceinner-membrane translocator7e-1375.1
NC_008543:2035292:2035292203529220365631272Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceinner-membrane translocator7e-1375.1
NC_009718:579291:5821335821335838211689Fervidobacterium nodosum Rt17-B1, complete genomeinner-membrane translocator7e-1375.1
NC_008702:4064470:4088347408834740894441098Azoarcus sp. BH72, complete genomeputative branched-chain amino acid transport permease7e-1375.1
NC_011001:2517159:2517929251792925192001272Burkholderia cenocepacia J2315 chromosome 2, complete sequenceleucine/isoleucine/valine transporter permease subunit7e-1375.1
NC_010515:2358134:2374273237427323755441272Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceinner-membrane translocator8e-1374.7
NC_008785:914411:9375709375709387391170Burkholderia mallei SAVP1 chromosome II, complete sequenceABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein9e-1374.7
NC_010511:637214:6517406517406527531014Methylobacterium sp. 4-46 chromosome, complete genomeinner-membrane translocator1e-1274.3
NC_004193:701622:719968719968720954987Oceanobacillus iheyensis HTE831, complete genomebranched-chain amino acid ABC transporter permease1e-1274.3
NC_009434:3434381:3457774345777434587811008Pseudomonas stutzeri A1501, complete genomebranched-chain amino acid ABC transporter, permease protein1e-1274.3
NC_010552:2089140:2090611209061120918821272Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceinner-membrane translocator1e-1273.9
NC_011060:1898224:193093419309341931929996Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator2e-1273.6
NC_016147:2820232:282635928263592827195837Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeinner-membrane translocator2e-1273.6
NC_013199:282901:299234299234300184951Lactobacillus rhamnosus Lc 705, complete genomehigh affinity branched-chain amino acid ABC transporter, permease component2e-1273.6
NC_013198:298000:317201317201318151951Lactobacillus rhamnosus GG, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein2e-1273.6
NC_015224:279037:2836292836292849151287Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,leucine/isoleucine/valine transporter permease subunit3e-1273.2
NC_010676:2720068:272449027244902725470981Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator3e-1273.2
NC_016582:9422650:9440777944077794425161740Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative branched-chain amino acid ABC transporter permease6e-1272
NC_007908:1108494:1153859115385911548601002Rhodoferax ferrireducens T118, complete genomeinner-membrane translocator8e-1271.6
NC_007643:3799425:380586938058693806813945Rhodospirillum rubrum ATCC 11170, complete genomeinner-membrane translocator1e-1171.2
NC_015318:1583839:158961515896151590490876Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit1e-1170.9
NC_016147:3023180:304202330420233043000978Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeABC-type branched-chain amino acid transport system1e-1170.9
NC_010086:1816378:1877133187713318783021170Burkholderia multivorans ATCC 17616 chromosome 2, completeinner-membrane translocator1e-1170.5
NC_010805:575709:5970025970025981711170Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system permease protein1e-1170.5
NC_009255:1105786:1145385114538511465541170Burkholderia vietnamiensis G4 chromosome 2, complete sequenceinner-membrane translocator1e-1170.5
NC_019897:2908971:2913408291340829151981791Thermobacillus composti KWC4 chromosome, complete genomebranched-chain amino acid ABC transporter permease3e-1169.7
NC_002937:614000:6191546191546203771224Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched-chain amino acid ABC transporter, permease protein2e-1169.7
NC_008751:2774000:2792703279270327939261224Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeinner-membrane translocator2e-1169.7
NC_005773:694990:6999396999397012521314Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh-affinity branched-chain amino acid ABC transporter, permease protein BraE4e-1169.3
NC_014837:1144500:1166422116642211688902469Pantoea sp. At-9b chromosome, complete genomeABC transporter-like protein5e-1168.9
NC_013524:392089:4069004069004088221923Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeABC transporter related protein5e-1168.9
NC_016114:5539021:5560448556044855621781731Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeinner-membrane translocator6e-1168.6
NC_011894:2125474:2124458212445821254771020Methylobacterium nodulans ORS 2060, complete genomeinner-membrane translocator6e-1168.6
NC_012108:3824977:3828303382830338301771875Desulfobacterium autotrophicum HRM2, complete genomeABC-type branched-chain amino acid transport system, permease component8e-1168.2
NC_012724:3222415:3243959324395932451311173Burkholderia glumae BGR1 chromosome 1, complete genomeInner-membrane translocator7e-1168.2
NC_008786:3045770:3067394306739430684701077Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator2e-1067.4
NC_014334:267409:285830285830286780951Lactobacillus casei str. Zhang chromosome, complete genomeputative amino acid ABC transporter permease2e-1067.4
NC_008526:250000:268989268989269939951Lactobacillus casei ATCC 334, complete genomePredicted amino acid ABC-type transport system, permease component2e-1067.4
NC_010999:252605:268261268261269211951Lactobacillus casei, complete genomeBranched-chain amino acid ABC transporter, permease protein2e-1067.4
NC_011768:79297:9729197291983641074Desulfatibacillum alkenivorans AK-01, complete genomeinner-membrane translocator2e-1067
NC_010729:1462135:147325514732551474157903Porphyromonas gingivalis ATCC 33277, complete genomeprobable ABC transporter membrane protein2e-1066.6
NC_015957:8103472:8103472810347281052261755Streptomyces violaceusniger Tu 4113 chromosome, complete genomeABC transporter integral membrane subunit2e-1066.6
NC_008705:3201817:3206705320670532079851281Mycobacterium sp. KMS, complete genomeinner-membrane translocator3e-1066.2
NC_007336:66000:7065970659716901032Ralstonia eutropha JMP134 megaplasmid, complete sequenceinner-membrane translocator3e-1066.2
NC_011742:3799788:3802980380298038042571278Escherichia coli S88 chromosome, complete genomeleucine/isoleucine/valine transporter permease subunit3e-1066.2
NC_007946:3855445:3855445385544538567221278Escherichia coli UTI89, complete genomehigh-affinity branched-chain amino acid transport system permease protein livM3e-1066.2
NC_008563:3888232:3888232388823238895091278Escherichia coli APEC O1, complete genomeleucine/isoleucine/valine transporter subunit LivM3e-1066.2
NC_003047:3202125:321969032196903220682993Sinorhizobium meliloti 1021, complete genomePUTATIVE PERMEASE ABC TRANSPORTER PROTEIN3e-1066.2
NC_014098:3133440:3133440313344031344711032Bacillus tusciae DSM 2912 chromosome, complete genomeinner-membrane translocator4e-1065.9
NC_013895:1282566:1293495129349512945141020Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete4e-1065.9
NC_017059:469108:4891294891294902501122Rhodospirillum photometricum DSM 122, complete genomeInner-membrane translocator4e-1065.9
NC_013595:5221330:5236791523679152378371047Streptosporangium roseum DSM 43021, complete genomeinner-membrane translocator5e-1065.5
NC_021177:1736854:1748293174829317501251833Streptomyces fulvissimus DSM 40593, complete genomeBranched chain amino acid transport permease6e-1065.5
NC_013592:3263005:328062732806273281514888Dickeya dadantii Ech586, complete genomeinner-membrane translocator6e-1065.1
NC_016633:1898234:1897221189722118982371017Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter permease1e-0964.3
NC_010003:528855:5474935474935492081716Petrotoga mobilis SJ95, complete genomeinner-membrane translocator1e-0964.3
NC_013510:3324978:3332076333207633332571182Thermomonospora curvata DSM 43183, complete genomeinner-membrane translocator2e-0963.9
NC_010645:1341475:1364542136454213663351794Bordetella avium 197N, complete genomeABC tranpsorter, ATP binding/permease protein1e-0963.9
NC_010170:4739925:474591447459144746852939Bordetella petrii, complete genomeputative branched-chain amino acid transport permease1e-0963.9
NC_005125:2811986:2850775285077528518841110Gloeobacter violaceus PCC 7421, complete genomebranched-chain amino acid transport protein BraE homolog4e-0962.8
NC_017506:1100679:112439011243901125346957Marinobacter adhaerens HP15 chromosome, complete genomeinner-membrane translocator5e-0962.4
NC_003155:7453994:7473858747385874756331776Streptomyces avermitilis MA-4680, complete genomebranched-chain amino acid ABC transporter permease protein5e-0962.4
NC_015422:3836911:3838447383844738395231077Alicycliphilus denitrificans K601 chromosome, complete genomeABC transporter integral membrane subunit5e-0962
NC_015711:3085038:3109577310957731106411065Myxococcus fulvus HW-1 chromosome, complete genomeputative branched chain amino acid ABC transporter permease6e-0962
NC_015275:566000:5688205688205698991080Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit6e-0962
NC_015556:819503:8333088333088345821275Pseudomonas fulva 12-X chromosome, complete genomeinner-membrane translocator8e-0961.6
NC_010170:1219641:122504712250471225991945Bordetella petrii, complete genomebranched-chain amino acid ABC transporter, permease protein8e-0961.6
NC_016906:3006748:3009121300912130103261206Gordonia polyisoprenivorans VH2 chromosome, complete genomehigh-affinity branched-chain amino acid transport system permease protein BraE9e-0961.2
NC_009436:2685910:2689212268921226905011290Enterobacter sp. 638, complete genomeinner-membrane translocator1e-0861.2
NC_008786:5128363:514039451403945141326933Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator1e-0861.2
NC_008148:2053467:2056112205611220572691158Rubrobacter xylanophilus DSM 9941, complete genomeinner-membrane translocator1e-0861.2
NC_008687:229941:2376482376482386641017Paracoccus denitrificans PD1222 chromosome 2, complete sequenceinner-membrane translocator1e-0860.8
NC_014831:2133060:2139824213982421408641041Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family2e-0860.5
NC_007298:2947200:296968429696842970646963Dechloromonas aromatica RCB, complete genomeinner-membrane translocator2e-0860.1
NC_013740:15401:195671956720547981Acidaminococcus fermentans DSM 20731, complete genomeinner-membrane translocator3e-0859.7
NC_007645:1245927:1263558126355812648531296Hahella chejuensis KCTC 2396, complete genomeABC-type branched-chain amino acid transport system, permease component3e-0859.7
NC_012791:2233098:2246354224635422475501197Variovorax paradoxus S110 chromosome 1, complete genomeinner-membrane translocator4e-0858.9
NC_010505:4676403:4702057470205747038621806Methylobacterium radiotolerans JCM 2831, complete genomeABC transporter related6e-0858.5
NC_018581:3202281:3216933321693332197612829Gordonia sp. KTR9 chromosome, complete genomeABC-type branched-chain amino acid transport systems, ATPase component8e-0858.2
NC_007503:2010858:201490820149082015876969Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein1e-0757.4
NC_014831:2133060:2170027217002721727202694Thermaerobacter marianensis DSM 12885 chromosome, complete genomeABC transporter related protein2e-0756.6
NC_009092:3057319:3074392307439230754651074Shewanella loihica PV-4, complete genomeinner-membrane translocator3e-0756.2
NC_010557:679656:6929566929566941251170Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceinner-membrane translocator6e-0755.5
NC_014931:6203872:6204965620496562060291065Variovorax paradoxus EPS chromosome, complete genomeinner-membrane translocator7e-0755.1
NC_015727:1294532:1317921131792113189281008Cupriavidus necator N-1 plasmid BB1p, complete sequenceABC transporter permease1e-0654.3
NC_011661:961129:964640964640965623984Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator1e-0654.3
NC_008786:3323167:3346604334660433476801077Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator1e-0654.3
NC_011297:787932:793781793781794773993Dictyoglomus thermophilum H-6-12, complete genomebranched-chain amino acid ABC transporter permease protein2e-0653.9
NC_020908:5047410:5053342505334250544481107Octadecabacter arcticus 238, complete genomeputative branched-chain amino acid transport permease component2e-0653.9
NC_007604:2555000:257481925748192575742924Synechococcus elongatus PCC 7942, complete genomeputative branched-chain amino acid ABC transporter, permease protein2e-0653.5
NC_014831:786011:7909667909667921111146Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family3e-0653.1
NC_013939:913890:930581930581931426846Deferribacter desulfuricans SSM1, complete genomebranched-chain amino acid ABC transporter permease4e-0652.8
NC_010551:1462827:1479140147914014803661227Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceinner-membrane translocator4e-0652.4
NC_011060:459615:4661074661074680111905Pelodictyon phaeoclathratiforme BU-1, complete genomeABC transporter related5e-0652
NC_015556:4025559:4035950403595040369751026Pseudomonas fulva 12-X chromosome, complete genomeinner-membrane translocator6e-0652
NC_005296:4574213:4575257457525745763301074Rhodopseudomonas palustris CGA009, complete genomeputative branched-chain amino acid transport system permease protein8e-0651.6