Pre_GI: BLASTP Hits

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Query: NC_007953:572926:575063 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 575063, End: 575872, Length: 810

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010508:1865602:188627718862771887062786Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencehypothetical protein5e-94343
NC_008543:2666846:268154126815412682320780Burkholderia cenocepacia HI2424 chromosome 2, complete sequencehypothetical protein3e-90331
NC_008061:2582000:258466925846692585448780Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehypothetical protein2e-89328
NC_010508:1865602:187342918734291874247819Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencehypothetical protein9e-78290
NC_007484:1229899:123659912365991237330732Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein5e-49194
NC_015497:3614817:363359636335963634357762Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein8e-42170
NC_011138:1374520:137452013745201375269750Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein1e-38160
NC_014654:549966:557613557613558389777Halanaerobium sp. 'sapolanicus' chromosome, complete genomehypothetical protein2e-34146
NC_003155:883500:889498889498889851354Streptomyces avermitilis MA-4680, complete genomehypothetical protein6e-0754.7