Pre_GI: BLASTP Hits

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Query: NC_007953:314872:339563 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 339563, End: 340129, Length: 567

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016943:3270308:331675333167533317703951Blastococcus saxobsidens DD2, complete genomephosphoglycerate dehydrogenase (PGDH), serA-like2e-28125
NC_016582:6811273:681127368112736812232960Streptomyces bingchenggensis BCW-1 chromosome, complete genome2-hydroxyacid dehydrogenase1e-1996.3
NC_007645:713930:716738716738717715978Hahella chejuensis KCTC 2396, complete genomePhosphoglycerate dehydrogenase and related dehydrogenase7e-1993.6
NC_015381:4363005:4364462436446243654811020Burkholderia gladioli BSR3 chromosome 1, complete sequenceglyoxylate reductase4e-1167.8
NC_010002:3887926:3891997389199738930311035Delftia acidovorans SPH-1, complete genomeD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding4e-1167.8
NC_015320:1342105:1356727135672713582981572Archaeoglobus veneficus SNP6 chromosome, complete genomeD-3-phosphoglycerate dehydrogenase1e-0962.8
NC_019977:1621939:1634583163458316363071725Methanomethylovorans hollandica DSM 15978, complete genomeD-3-phosphoglycerate dehydrogenase1e-0962.4
NC_010803:2067539:210024721002472101164918Chlorobium limicola DSM 245, complete genomeD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding4e-0961.2
NC_013956:1762171:180359318035931804573981Pantoea ananatis LMG 20103 chromosome, complete genomeGyaR6e-0857.4
NC_015738:1971211:1974621197462119762011581Eggerthella sp. YY7918, complete genomephosphoglycerate dehydrogenase7e-0857
NC_013741:565389:5862365862365878131578Archaeoglobus profundus DSM 5631, complete genomeD-3-phosphoglycerate dehydrogenase1e-0755.8
NC_014804:1354970:135561913556191356542924Thermococcus barophilus MP chromosome, complete genomeD-3-phosphoglycerate dehydrogenase8e-0753.5
NC_015727:1050500:106732310673231068276954Cupriavidus necator N-1 plasmid BB1p, complete sequenceglycerate dehydrogenase HprA9e-0753.1
NC_019892:7822000:7845491784549178471191629Singulisphaera acidiphila DSM 18658 chromosome, complete genomeD-3-phosphoglycerate dehydrogenase1e-0653.1
NC_004193:2692136:2692136269213626937221587Oceanobacillus iheyensis HTE831, complete genomephosphoglycerate dehydrogenase2e-0652
NC_019907:920797:9364999364999380941596Liberibacter crescens BT-1 chromosome, complete genomeD-3-phosphoglycerate dehydrogenase2e-0652
NC_007681:1300068:1318133131813313197071575Methanosphaera stadtmanae DSM 3091, complete genomeSerA2e-0652
NC_015636:1603664:1604242160424216058131572Methanothermococcus okinawensis IH1 chromosome, complete genomeD-3-phosphoglycerate dehydrogenase3e-0651.6
NC_007644:3229:2031420314218911578Moorella thermoacetica ATCC 39073, complete genomeD-3-phosphoglycerate dehydrogenase3e-0651.6
NC_018876:863314:8669428669428685131572Methanolobus psychrophilus R15 chromosome, complete genomeD-3-phosphoglycerate dehydrogenase3e-0651.2
NC_013205:1275012:1275012127501212766011590Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,D-3-phosphoglycerate dehydrogenase4e-0651.2
NC_015954:463500:4655584655584671411584Halophilic archaeon DL31 chromosome, complete genomeD-3-phosphoglycerate dehydrogenase5e-0650.8
NC_010511:7024412:7024707702470770263021596Methylobacterium sp. 4-46 chromosome, complete genomeD-3-phosphoglycerate dehydrogenase9e-0650.1