Pre_GI: BLASTP Hits

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Query: NC_007952:444616:451060 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 451060, End: 451521, Length: 462

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010676:3009980:301873430187343019195462Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein2e-63241
NC_010681:1202929:121095112109511211418468Burkholderia phytofirmans PsJN chromosome 1, complete sequencehypothetical protein7e-49192
NC_015137:1207769:121281612128161213292477Burkholderia sp. CCGE1001 chromosome 2, complete sequencehypothetical protein2e-47187
NC_015136:912276:920231920231920683453Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein1e-46184