Pre_GI: BLASTP Hits

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Query: NC_007952:444616:446889 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 446889, End: 447950, Length: 1062

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016631:6081384:6102677610267761037351059Granulicella mallensis MP5ACTX8 chromosome, complete genomeAlkanesulfonate monooxygenase3e-42172
NC_010296:2695186:2710629271062927117261098Microcystis aeruginosa NIES-843, complete genomealkanesulfonate monooxygenase5e-33142
NC_010296:2695186:2709065270906527101141050Microcystis aeruginosa NIES-843, complete genomealkanesulfonate monooxygenase7e-31134
NC_013172:3093467:3110773311077331118281056Brachybacterium faecium DSM 4810, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase2e-29129
NC_011283:2323687:2336190233619023373171128Klebsiella pneumoniae 342 chromosome, complete genomemonooxygenase, luciferase family5e-29129
NC_011894:5056901:5085098508509850861981101Methylobacterium nodulans ORS 2060, complete genomeLuciferase-like monooxygenase6e-29128
NC_010557:316000:3380693380693391721104Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceLuciferase-like monooxygenase4e-28125
NC_015567:547500:5767055767055777961092Serratia sp. AS9 chromosome, complete genomealkanesulfonate monooxygenase4e-27122
NC_015566:547387:5765195765195776101092Serratia sp. AS12 chromosome, complete genomealkanesulfonate monooxygenase4e-27122
NC_015954:1986705:1998544199854419997101167Halophilic archaeon DL31 chromosome, complete genomealkanesulfonate monooxygenase2e-25117
NC_014121:2745097:2745097274509727462421146Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completealkanesulfonate monooxygenase2e-22107
NC_016830:6499234:6500024650002465011721149Pseudomonas fluorescens F113 chromosome, complete genomeprotein SsuD4e-21102
NC_013510:517878:5352065352065363691164Thermomonospora curvata DSM 43183, complete genomeAlkanesulfonate monooxygenase4e-21102
NC_013406:1217385:1263854126385412649961143Paenibacillus sp. Y412MC10 chromosome, complete genomeAlkanesulfonate monooxygenase1e-20100
NC_008542:1727000:1727063172706317282201158Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceAlkanesulfonate monooxygenase2e-20100
NC_008060:1182378:1182378118237811835351158Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceAlkanesulfonate monooxygenase2e-20100
NC_013892:1503162:1545802154580215468571056Xenorhabdus bovienii SS-2004 chromosome, complete genomeluciferase-like ATPase domain-containing protein3e-2099.8
NC_008027:3677500:3688065368806536892161152Pseudomonas entomophila L48, complete genomealkanesulfonate monooxygenase5e-2099
NC_021066:2197490:2197490219749021986351146Raoultella ornithinolytica B6, complete genomealkanesulfonate monooxygenase5e-2099
NC_019673:9084045:9098660909866090998021143Saccharothrix espanaensis DSM 44229 complete genomeAlkanesulfonate monooxygenase6e-2098.6
NC_010508:1705500:1705583170558317067401158Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceAlkanesulfonate monooxygenase6e-2098.6
NC_010296:2695186:2705779270577927068971119Microcystis aeruginosa NIES-843, complete genomealiphatic sulfonate monooxygenase5e-1995.5
NC_009439:4734237:4736372473637247375201149Pseudomonas mendocina ymp, complete genomealkanesulfonate monooxygenase6e-1995.1
NC_015312:1371530:1393925139392513950281104Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeluciferase-like protein2e-1893.6
NC_009659:1129066:1148354114835411494811128Janthinobacterium sp. Marseille chromosome, complete genomealkanesulfonate monooxygenase4e-1892.4
NC_016023:1839503:1840504184050418416371134Bacillus coagulans 36D1 chromosome, complete genomealkanesulfonate monooxygenase, FMNH(2)-dependent2e-1687
NC_015276:1531159:1531159153115915322441086Marinomonas mediterranea MMB-1 chromosome, complete genomepyrimidine utilization protein A1e-1584
NC_012522:7837071:784362278436227844551930Rhodococcus opacus B4, complete genomeputative oxidoreductase2e-1583.6
NC_014221:1167261:1173177117317711742861110Truepera radiovictrix DSM 17093 chromosome, complete genomeAlkanesulfonate monooxygenase1e-1481.3
NC_021171:2019755:2035151203515120362031053Bacillus sp. 1NLA3E, complete genomehypothetical protein2e-1377
NC_008800:2127918:2129142212914221302451104Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,alkanesulfonate monooxygenase4e-1375.9
NC_012791:4079062:4100395410039541015041110Variovorax paradoxus S110 chromosome 1, complete genomeAlkanesulfonate monooxygenase1e-1274.7
NC_009485:3461051:3462256346225634633591104Bradyrhizobium sp. BTAi1 chromosome, complete genomesulfonate monooxygenase3e-1272.8
NC_012969:142000:1430961430961442681173Methylovorus glucosetrophus SIP3-4 chromosome, complete genomealkanesulfonate monooxygenase4e-1272.8
NC_007509:644000:6453446453446465311188Burkholderia sp. 383 chromosome 3, complete sequenceflavin-dependent oxidoreductase7e-1271.6
NC_013172:3093467:3118831311883131199551125Brachybacterium faecium DSM 4810, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase5e-1168.9
NC_008271:140846:159267159267160157891Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencepossible hybride transferase/ F420-dependent dehydrogenase5e-1168.9
NC_019962:3331849:333184933318493332721873Natrinema pellirubrum DSM 15624, complete genomeputative F420-dependent oxidoreductase, Rv2161c family1e-1067.8
NC_015957:5082172:5086986508698650880471062Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative F420-dependent oxidoreductase2e-1067
NC_008268:7052202:705220270522027053074873Rhodococcus sp. RHA1, complete genomepossible hydride transferase5e-1065.9
NC_008596:2873675:287367528736752874541867Mycobacterium smegmatis str. MC2 155, complete genomehydride transferase 16e-1065.5
NC_010725:5217260:5233190523319052342871098Methylobacterium populi BJ001, complete genomeAlkanesulfonate monooxygenase3e-0963.2
NC_007384:1086025:1109563110956311114341872Shigella sonnei Ss046, complete genome5e-0962.4
NC_007355:499764:5060865060865071141029Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceF420-dependent glucose-6-phosphate dehydrogenase5e-0962.4
NC_010510:339879:3669363669363683451410Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative monooxygenase1e-0860.8
NC_015580:3252534:3275102327510232764241323Novosphingobium sp. PP1Y, complete genomecoenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein2e-0860.5
NC_004578:2671508:2675565267556526769111347Pseudomonas syringae pv. tomato str. DC3000, complete genomemonooxygenase, NtaA/SnaA/SoxA family2e-0860.1
NC_015376:2061990:2082163208216320835541392Burkholderia gladioli BSR3 chromosome chromosome 2, completePutative monooxygenase, DszA family protein4e-0859.3
NC_012669:96966:116343116343117266924Beutenbergia cavernae DSM 12333, complete genomeLuciferase-like monooxygenase7e-0858.5
NC_009921:3999040:4006202400620240072151014Frankia sp. EAN1pec, complete genomeluciferase family protein1e-0757.8
NC_016631:4113794:4133907413390741349171011Granulicella mallensis MP5ACTX8 chromosome, complete genomeLuciferase-like, subgroup1e-0757.8
NC_010162:7824878:7839045783904578404031359Sorangium cellulosum 'So ce 56', complete genomenitrilotriacetate monooxygenase component A2e-0757.4
NC_009921:593665:601149601149602132984Frankia sp. EAN1pec, complete genomeluciferase family protein2e-0757.4
NC_013131:8480384:852485585248558525784930Catenulispora acidiphila DSM 44928, complete genomeLuciferase-like monooxygenase3e-0756.6
NC_015957:5136500:513912751391275140086960Streptomyces violaceusniger Tu 4113 chromosome, complete genomeluciferase-like protein3e-0756.6
NC_009921:3419978:343679634367963437671876Frankia sp. EAN1pec, complete genomeluciferase family protein3e-0756.6
NC_010628:2136995:2140175214017521415391365Nostoc punctiforme PCC 73102, complete genomemonooxygenase-like protein4e-0755.8
NC_009921:565947:570804570804571682879Frankia sp. EAN1pec, complete genomeluciferase family protein6e-0755.5
NC_021177:7815791:783722278372227838139918Streptomyces fulvissimus DSM 40593, complete genomeHydride transferase 18e-0755.1
NC_020064:3998715:4028208402820840292901083Serratia marcescens FGI94, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase8e-0755.1
NC_008595:1869284:1881648188164818828501203Mycobacterium avium 104, complete genomehypothetical protein1e-0654.7
NC_008278:925231:939757939757940668912Frankia alni ACN14a, complete genomehypothetical protein1e-0654.7
NC_010694:1966676:1978227197822719795731347Erwinia tasmaniensis, complete genomePutative monooxygenase1e-0653.9
NC_010628:2136995:2141654214165421430211368Nostoc punctiforme PCC 73102, complete genomemonooxygenase-like protein2e-0653.5
NC_009921:5508000:551469555146955515615921Frankia sp. EAN1pec, complete genomeluciferase family protein3e-0653.1
NC_006361:498305:5147835147835160901308Nocardia farcinica IFM 10152, complete genomeputative monooxygenase3e-0652.8
NC_016948:3023940:303165530316553032569915Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein4e-0652.8
NC_006361:3132000:313741631374163138288873Nocardia farcinica IFM 10152, complete genomehypothetical protein4e-0652.8
NC_008595:312861:3315133315133328681356Mycobacterium avium 104, complete genomenitrilotriacetate monooxygenase component A5e-0652.4
NC_010612:835648:8378668378668391971332Mycobacterium marinum M, complete genomeFMNH2-utilizing oxygenase5e-0652.4
NC_010407:410918:4125254125254139671443Clavibacter michiganensis subsp. sepedonicus chromosome, completehypothetical protein6e-0652.4