Pre_GI: BLASTP Hits

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Query: NC_007952:3283394:3314773 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3314773, End: 3315504, Length: 732

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007951:925442:933365933365934096732Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein1e-109395
NC_014540:2828299:284792128479212848658738Burkholderia sp. CCGE1003 chromosome 2, complete sequencehypothetical protein2e-104378
NC_010623:1871492:188086618808661881597732Burkholderia phymatum STM815 chromosome 2, complete sequencehypothetical protein4e-34144
NC_010622:249625:297155297155297871717Burkholderia phymatum STM815 chromosome 1, complete sequencehypothetical protein9e-30130
NC_015458:2338437:235494123549412355519579Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein1e-24113
NC_008825:2564965:256703325670332567860828Methylibium petroleiphilum PM1, complete genomehypothetical protein1e-1686.7
NC_007086:1224867:125306112530611253819759Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein1e-1686.7
NC_003902:3666544:369397736939773694735759Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-1686.7
NC_011662:1017933:102518310251831025941759Thauera sp. MZ1T, complete genomehypothetical protein5e-1684.7
NC_007951:925442:935483935483935776294Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein7e-1374.3
NC_019968:175480:185222185222185983762Prevotella dentalis DSM 3688 chromosome 2, complete sequenceProtein of unknwon function (DUF2893)1e-1170.1
NC_015164:3997743:399774339977433998504762Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein2e-0962.8
NC_013410:2519441:253584825358482536603756Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein8e-0960.8
NC_010623:1871492:188052218805221880689168Burkholderia phymatum STM815 chromosome 2, complete sequencehypothetical protein4e-0652