Pre_GI: BLASTP Hits

Some Help

Query: NC_007952:3238241:3250913 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3250913, End: 3251371, Length: 459

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013166:194614:207574207574208032459Kangiella koreensis DSM 16069, complete genomehypothetical protein1e-41168
NC_007912:3921308:393417239341723934630459Saccharophagus degradans 2-40, complete genomehypothetical protein4e-41166
NC_004460:1237129:124937112493711249832462Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein2e-36151
NC_013730:2799287:280570728057072806174468Spirosoma linguale DSM 74, complete genomehypothetical protein1e-30132
AP010958:5361207:537596353759635376424462Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein4e-27120
NC_002655:1332961:134197213419721342433462Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W4e-27120
NC_013353:5361207:537596353759635376424462Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-27120
NC_013364:1183000:119322911932291193690462Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-27120
NC_013008:3231414:323788532378853238346462Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-27119
NC_017191:1173989:121145512114551211955501Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein6e-2096.3
NC_017188:1172181:120987812098781210378501Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein6e-2096.3
NC_010162:193536:205673205673206164492Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-0753.9