Pre_GI: BLASTP Hits

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Query: NC_007952:3238241:3244590 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3244590, End: 3246095, Length: 1506

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018012:3102215:3111642311164231130181377Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein3e-92339
NC_011740:810411:8225408225408240061467Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-32141
NC_010322:583842:6050996050996066491551Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein3e-32140
NC_014311:978761:9905089905089917071200Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-28127
NC_007005:1705406:1706691170669117081571467Pseudomonas syringae pv. syringae B728a, complete genomeSEC-C motif7e-24112
NC_013716:3512950:3547684354768435490031320Citrobacter rodentium ICC168, complete genomehypothetical protein2e-23110
NC_017045:1:178931789318576684Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hypothetical protein2e-22107
NC_020054:3132478:3142069314206931432981230Fibrella aestuarina BUZ 2 drat genomehypothetical protein3e-1273.9