Pre_GI: BLASTP Hits

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Query: NC_007952:3196085:3201796 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3201796, End: 3202737, Length: 942

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014310:1900653:190241619024161903252837Ralstonia solanacearum PSI07 megaplasmid, complete sequenceisomerase9e-57220
NC_003295:3421520:343966634396663440511846Ralstonia solanacearum GMI1000, complete genomePUTATIVE SIGNAL PEPTIDE PROTEIN8e-56217
NC_007347:3204637:321235932123593213177819Ralstonia eutropha JMP134 chromosome 1, complete sequencePpiC-type peptidyl-prolyl cis-trans isomerase2e-55216
NC_016616:2997348:304025430402543041102849Dechlorosoma suillum PS chromosome, complete genomePPIC-type PPIASE family protein7e-45181
NC_014722:1497244:151555515155551516337783Burkholderia rhizoxinica HKI 454, complete genomepeptidyl-prolyl cis-trans isomerase8e-2097.8
NC_006351:1886475:189032018903201891054735Burkholderia pseudomallei K96243 chromosome 2, complete sequencerotamase4e-1065.9
NC_007435:566436:570543570543571277735Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative rotamase9e-1064.7
NC_009075:1906915:191076219107621911424663Burkholderia pseudomallei 668 chromosome II, complete sequencerotamase1e-0964.3
NC_002947:2589951:2633536263353626354071872Pseudomonas putida KT2440, complete genomepeptidyl-prolyl cis-trans isomerase D, putative6e-0755.5
NC_014654:1:2808328083291051023Halanaerobium sp. 'sapolanicus' chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase9e-0754.7
NC_015425:2690448:270301927030192703762744Clostridium botulinum BKT015925 chromosome, complete genomepeptidil-prolyl cis-trans isomerase1e-0653.9
NC_011837:3776541:378048837804883781264777Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0653.9
NC_009706:3845039:384901938490193849762744Clostridium kluyveri DSM 555 chromosome, complete genomefoldase-like protein2e-0653.9
NC_008593:2457594:247010024701002470843744Clostridium novyi NT, complete genomepeptidil-prolyl cis-trans isomerase3e-0652.8
NC_008767:273759:2773432773432785601218Neisseria meningitidis FAM18, complete genomeputative rotamase1e-0551.2