Pre_GI: BLASTP Hits

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Query: NC_007952:2812996:2833729 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 2833729, End: 2834592, Length: 864

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019970:813917:831740831740832549810Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, permease component1e-28127
NC_016627:1807866:182665718266571827475819Clostridium clariflavum DSM 19732 chromosome, complete genomenitrate/sulfonate/bicarbonate ABC transporter permease7e-28124
NC_015660:739040:738247738247739056810Geobacillus thermoglucosidasius C56-YS93 chromosome, completeABC transporter integral membrane protein4e-27122
NC_014915:2963500:300530530053053006114810Geobacillus sp. Y412MC52 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-26118
NC_013411:597235:597821597821598630810Geobacillus sp. Y412MC61, complete genomebinding-protein-dependent transport systems inner membrane component4e-26118
NC_014614:86213:913679136792236870Clostridium sticklandii, complete genomeSsuC9e-25114
NC_005085:2457295:247921124792112479978768Chromobacterium violaceum ATCC 12472, complete genomeprobable ABC transporter permease protein4e-24112
NC_016584:1912000:191311419131141913905792Desulfosporosinus orientis DSM 765 chromosome, complete genomenitrate/sulfonate/bicarbonate ABC transporter permease9e-24110
NC_016048:522637:525277525277526092816Oscillibacter valericigenes Sjm18-20, complete genomeputative ABC transporter permease protein8e-23107
NC_014221:687537:689918689918690670753Truepera radiovictrix DSM 17093 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-20100
NC_009921:3666898:368591536859153686760846Frankia sp. EAN1pec, complete genomebinding-protein-dependent transport systems inner membrane component5e-2098.2
NC_011894:3029964:307557230755723076393822Methylobacterium nodulans ORS 2060, complete genomebinding-protein-dependent transport systems inner membrane component8e-2097.8
NC_010511:871905:879670879670880491822Methylobacterium sp. 4-46 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein5e-1892
NC_015859:1898693:189869318986931899628936Corynebacterium variabile DSM 44702 chromosome, complete genomeABC transport system permease2e-1686.7
NC_014376:3214222:322811232281123228909798Clostridium saccharolyticum WM1 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-1584
NC_010572:1081236:110506311050631105926864Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter permease protein7e-1478.2
NC_015957:7348269:736944073694407369970531Streptomyces violaceusniger Tu 4113 chromosome, complete genomeABC transporter integral membrane subunit1e-1377.4
NC_016943:4194002:424408742440874245025939Blastococcus saxobsidens DD2, complete genomeputative Binding-protein-dependent transport systems inner membrane component5e-1375.1
NC_002678:7004370:702902470290247029779756Mesorhizobium loti MAFF303099, complete genomeABC transporter, permease protein5e-1375.1
NC_012914:5618000:564387556438755644627753Paenibacillus sp. JDR-2, complete genomebinding-protein-dependent transport systems inner membrane component1e-1170.5
NC_015259:1512563:152895715289571529790834Polymorphum gilvum SL003B-26A1 chromosome, complete genomeProbable aliphatic sulfonate ABC transporter, permease protein2e-1169.7
NC_013421:1954915:195491519549151955688774Pectobacterium wasabiae WPP163, complete genomebinding-protein-dependent transport systems inner membrane component3e-1169.3
NC_012225:345704:354194354194354964771Brachyspira hyodysenteriae WA1, complete genometaurine ABC transporter, permease protein3e-1169.3
NC_013515:550464:553101553101553850750Streptobacillus moniliformis DSM 12112, complete genomebinding-protein-dependent transport systems inner membrane component3e-1169.3
NC_016514:891772:933689933689934516828Enterobacter cloacae EcWSU1 chromosome, complete genomeTaurine transport system permease protein tauC4e-1168.9
NC_010623:72500:912379123792070834Burkholderia phymatum STM815 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component4e-1168.9
NC_015559:1478114:149525914952591496050792Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeABC transporter integral membrane protein5e-1168.6
NC_018607:290500:310784310784311554771Brachyspira pilosicoli B2904 chromosome, complete genometaurine ABC transporter permease5e-1168.6
NC_013510:517878:532671532671533492822Thermomonospora curvata DSM 43183, complete genomebinding-protein-dependent transport systems inner membrane component6e-1168.2
NC_009712:669647:701400701400702161762Candidatus Methanoregula boonei 6A8, complete genomebinding-protein-dependent transport systems inner membrane component8e-1167.8
NC_014623:7133149:714453371445337145288756Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeABC transporter permease1e-1067
NC_013457:979102:996543996543997343801Vibrio sp. Ex25 chromosome 2, complete genomehydroxymethylpyrimidine ABC transporter transmembrane component1e-1067
NC_011832:1148859:117477911747791175618840Candidatus Methanosphaerula palustris E1-9c, complete genomebinding-protein-dependent transport systems inner membrane component1e-0963.9
NC_018720:357716:380916380916381704789Bifidobacterium asteroides PRL2011 chromosome, complete genomeABC transporter, permease protein2e-0963.2
NC_017075:4259460:427775342777534278523771Rubrivivax gelatinosus IL144, complete genomeABC transporter permease2e-0962.8
NC_014394:808734:823666823666824496831Gallionella capsiferriformans ES-2 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-0962.4
NC_021182:4186515:419716441971644197994831Clostridium pasteurianum BC1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, permease component5e-0962
NC_015136:1301576:132543913254391326269831Burkholderia sp. CCGE1001 chromosome 1, complete sequencenitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein7e-0961.2
NC_017168:3192817:319474831947483195569822Yersinia pestis A1122 chromosome, complete genomeputative transport system permease1e-0860.8
NC_008148:3024867:304284130428413043611771Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component1e-0860.8
NC_019673:9084045:910154591015459102369825Saccharothrix espanaensis DSM 44229 complete genomeABC-type aliphatic sulfonates transporter,permease subunit1e-0860.8
NC_021182:4186515:420359942035994204381783Clostridium pasteurianum BC1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, permease component2e-0860.1
NC_014839:12519:241362413624882747Pantoea sp. At-9b plasmid pPAT9B02, complete sequencebinding-protein-dependent transport systems inner membrane component3e-0859.3
NC_015856:3170771:317220831722083173077870Collimonas fungivorans Ter331 chromosome, complete genomealkanesulfonates transport system permease5e-0858.5
NC_013421:4714478:4755899475589947575091611Pectobacterium wasabiae WPP163, complete genomebinding-protein-dependent transport systems inner membrane component5e-0858.5
NC_015276:1531159:153680015368001537759960Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, integral membrane subunit6e-0858.5
NC_014829:4565467:456622545662254566974750Bacillus cellulosilyticus DSM 2522 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component6e-0858.2
NC_013520:1936209:194300319430031943755753Veillonella parvula DSM 2008, complete genomebinding-protein-dependent transport systems inner membrane component7e-0858.2
NC_014171:723155:747020747020747772753Bacillus thuringiensis BMB171 chromosome, complete genomehydroxymethylpyrimidine transport system permease8e-0857.8
NC_014640:4193193:421082542108254211676852Achromobacter xylosoxidans A8 chromosome, complete genomebinding-protein-dependent transporter inner membrane component family protein 478e-0857.8
NC_014034:1507047:151154715115471512371825Rhodobacter capsulatus SB1003 chromosome, complete genomeABC transporter permease2e-0757
NC_005945:754517:753768753768754520753Bacillus anthracis str. Sterne, complete genomeABC transporter, permease protein, putative2e-0757
NC_009637:438037:453317453317454078762Methanococcus maripaludis C7 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-0757
NC_015589:870804:882372882372883175804Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0756.6
NC_015847:1261276:127124712712471272008762Methanococcus maripaludis XI chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0756.2
NC_005791:1173000:118387311838731184634762Methanococcus maripaludis S2, complete genometransport permease protein3e-0756.2
NC_017285:913000:9163859163859181601776Chlamydophila pneumoniae LPCoLN chromosome, complete genomeABC transporter permease3e-0756.2
NC_002491:1147169:1156824115682411585991776Chlamydophila pneumoniae J138, complete genomeABC transporter permease2e-0756.2
NC_000922:1147855:1160418116041811621931776Chlamydophila pneumoniae CWL029, complete genomeABC transporter permease2e-0756.2
NC_002179:904518:9092219092219109961776Chlamydophila pneumoniae AR39, complete genomeABC transporter, permease protein, putative2e-0756.2
NC_005043:1143557:1156121115612111578961776Chlamydophila pneumoniae TW-183, complete genomeABC transporter2e-0756.2
NC_016627:2637226:264015326401532640938786Clostridium clariflavum DSM 19732 chromosome, complete genomenitrate/sulfonate/bicarbonate ABC transporter permease2e-0756.2
NC_012925:191501:205330205330206094765Streptococcus suis P1/7, complete genomebinding-protein-dependent transport system protein4e-0755.8
NC_012791:4079062:4097306409730640983881083Variovorax paradoxus S110 chromosome 1, complete genomebinding-protein-dependent transport systems inner membrane component4e-0755.8
NC_013716:1298932:1298932129893213005001569Citrobacter rodentium ICC168, complete genomeABC transporter, permease component5e-0755.5
NC_020908:1920169:193948519394851940228744Octadecabacter arcticus 238, complete genomeABC transporter permease protein5e-0755.5
NC_013959:83992:975109751098487978Sideroxydans lithotrophicus ES-1 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-0755.5
NC_012560:3200961:321761032176103218605996Azotobacter vinelandii DJ, complete genomeABC transporter permease protein6e-0755.1
NC_021150:3200959:321760832176083218603996Azotobacter vinelandii CA6, complete genomeABC transporter permease protein6e-0755.1
NC_008595:2432184:245572724557272456554828Mycobacterium avium 104, complete genomeputative aliphatic sulfonates transport permease protein SsuC8e-0754.7
NC_016628:537137:569671569671570471801Vibrio furnissii NCTC 11218 chromosome 2, complete sequencenitrate/sulfonate/bicarbonate ABC transporter permease8e-0754.7
NC_021066:2197490:219864621986462199437792Raoultella ornithinolytica B6, complete genomealkanesulfonate transporter permease subunit8e-0754.7
NC_009634:547995:564167564167564928762Methanococcus vannielii SB chromosome, complete genomebinding-protein-dependent transport systems inner membrane component8e-0754.7
NC_014931:4985500:499939949993995000169771Variovorax paradoxus EPS chromosome, complete genomebinding-protein-dependent transport systems inner membrane component7e-0754.7
NC_012912:2998511:2998511299851130000971587Dickeya zeae Ech1591, complete genomebinding-protein-dependent transport systems inner membrane component1e-0653.9
NC_009135:330628:354277354277355038762Methanococcus maripaludis C5, complete genomebinding-protein-dependent transport systems inner membrane component2e-0653.5
NC_003030:1510000:154295015429501543702753Clostridium acetobutylicum ATCC 824, complete genomeABC transporter, permease component2e-0653.5
NC_003063:304962:330953330953331756804Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-0653.5
NC_015379:1600715:162600916260091626824816Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative ABC transporter, permease component2e-0653.1
NC_014121:2745097:274625227462522747043792Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completealkanesulfonate transporter permease subunit3e-0652.4
NC_015565:1163148:116623311662331167036804Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeABC transporter integral membrane protein4e-0652.4
NC_015942:63440:721447214473028885Acidithiobacillus ferrivorans SS3 chromosome, complete genomeABC transporter integral membrane subunit4e-0652.4
NC_004463:60225:821388213882956819Bradyrhizobium japonicum USDA 110, complete genomeABC transporter permease protein5e-0652
NC_009975:1374500:137795713779571378718762Methanococcus maripaludis C6, complete genomebinding-protein-dependent transport systems inner membrane component7e-0651.6
NC_017192:1841987:186931918693191870131813Arcobacter sp. L, complete genomealiphatic sulfonates ABC transporter permease component9e-0651.2